RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
VSX1-207ENST00000557285 EIF4BP23588 611 aaKnown RBP18.53■□□□□ 0.56
VSX1-207ENST00000557285 POLGP54098 1239 aaPredicted RBP18.53■□□□□ 0.56
VSX1-207ENST00000557285 MRPS5P82675 430 aaKnown RBP18.53■□□□□ 0.56
VSX1-207ENST00000557285 SPIRE1Q08AE8 756 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 PTPROQ16827 1216 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 TJAP1Q5JTD0 557 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 KSR1Q8IVT5 923 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 RNF169Q8NCN4 708 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 ATXN2LQ8WWM7 1075 aaKnown RBP18.53■□□□□ 0.56
VSX1-207ENST00000557285 ZNF689Q96CS4 500 aaPredicted RBP18.53■□□□□ 0.56
VSX1-207ENST00000557285 CEP89Q96ST8 783 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 RGS18Q9NS28 235 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 C1orf112Q9NSG2 853 aa18.53■□□□□ 0.56
VSX1-207ENST00000557285 TCF20Q9UGU0 1960 aaKnown RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 ARID2Q68CP9 1835 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 A0A087WZ62 844 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 TBKBP1A7MCY6 615 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 H3BNC9 293 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 ZBTB39O15060 712 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 FGFR1P11362 822 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 DARSP14868 501 aaKnown RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 YWHABP31946 246 aaKnown RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 ZNF174Q15697 407 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 XKR9Q5GH70 373 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 SPOUT1Q5T280 376 aaKnown RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 SLC24A5Q71RS6 500 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 CMTR2Q8IYT2 770 aaKnown RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 SLC7A3Q8WY07 619 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 TMEM143Q96AN5 459 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 ASB2Q96Q27 587 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 EIF2AK1Q9BQI3 630 aaKnown RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 FDXACB1Q9BRP7 624 aaPredicted RBP18.52■□□□□ 0.56
VSX1-207ENST00000557285 TMEM60Q9H2L4 133 aa18.52■□□□□ 0.56
VSX1-207ENST00000557285 CUL9Q8IWT3 2517 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 POTEMA6NI47 508 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 C9IYK1 514 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 MAFO75444 373 aaPredicted RBP18.51■□□□□ 0.55
VSX1-207ENST00000557285 CD2BP2O95400 341 aaKnown RBP18.51■□□□□ 0.55
VSX1-207ENST00000557285 ZSCAN20P17040 1043 aaPredicted RBP18.51■□□□□ 0.55
VSX1-207ENST00000557285 BMPR1AP36894 532 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 FAM102BQ5T8I3 360 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 CRIPAKQ8N1N5 446 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 FBXO18Q8NFZ0 1043 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 MRPL38Q96DV4 380 aaKnown RBP18.51■□□□□ 0.55
VSX1-207ENST00000557285 GCOM2Q9BZD3 368 aaPredicted RBP18.51■□□□□ 0.55
VSX1-207ENST00000557285 ZSWIM4Q9H7M6 989 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 LMCD1Q9NZU5 365 aa18.51■□□□□ 0.55
VSX1-207ENST00000557285 FNDC1Q4ZHG4 1894 aaPredicted RBP18.51■□□□□ 0.55
VSX1-207ENST00000557285 A0A087WWV3 80 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 IGKV6-21A0A0C4DH24 114 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 GRM6O15303 877 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 LINC00271P0C7V0 271 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 KCNQ1P51787 676 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 DSC3Q14574 896 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 NBR1Q14596 966 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 OTUD6AQ7L8S5 288 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 C4orf19Q8IY42 314 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 HLA-CQ95604 372 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 CCDC43Q96MW1 224 aaKnown RBP18.5■□□□□ 0.55
VSX1-207ENST00000557285 MTMR9Q96QG7 549 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 JPH2Q9BR39 696 aaPredicted RBP18.5■□□□□ 0.55
VSX1-207ENST00000557285 C11orf84Q9BUA3 381 aaPredicted RBP18.5■□□□□ 0.55
VSX1-207ENST00000557285 FOXP1Q9H334 677 aaPredicted RBP18.5■□□□□ 0.55
VSX1-207ENST00000557285 ATP6V0A4Q9HBG4 840 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 HCSTQ9UBK5 93 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 RWDD3Q9Y3V2 267 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 MYO7AQ13402 2215 aa18.5■□□□□ 0.55
VSX1-207ENST00000557285 ATG2AQ2TAZ0 1938 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 SLITRK3O94933 977 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 SRGAP2CP0DJJ0 459 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 EMC2Q15006 297 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 TTC38Q5R3I4 469 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 EP400NLQ6ZTU2 488 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 NOSTRINQ8IVI9 506 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 ZNF710Q8N1W2 664 aa18.49■□□□□ 0.55
VSX1-207ENST00000557285 CLP1Q92989 425 aaKnown RBP18.49■□□□□ 0.55
VSX1-207ENST00000557285 ALG13Q9NP73 1137 aaKnown RBP18.49■□□□□ 0.55
VSX1-207ENST00000557285 RFC5P40937 340 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 TECP42680 631 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 LONRF3Q496Y0 759 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 TCEAL5Q5H9L2 206 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 PRPF31Q8WWY3 499 aaKnown RBP18.48■□□□□ 0.55
VSX1-207ENST00000557285 PSPC1Q8WXF1 523 aaKnown RBP18.48■□□□□ 0.55
VSX1-207ENST00000557285 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
VSX1-207ENST00000557285 TMX3Q96JJ7 454 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 TMEM161AQ9NX61 479 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 COL4A3BPQ9Y5P4 624 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 BRWD1Q9NSI6 2320 aa18.48■□□□□ 0.55
VSX1-207ENST00000557285 C5orf67F2Z3F1 127 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 RB1P06400 928 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 OR52Z1P0C646 297 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 SFPQP23246 707 aaKnown RBP eCLIP18.47■□□□□ 0.55
VSX1-207ENST00000557285 CDC42EP1Q00587 391 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 TIGD5Q53EQ6 642 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 CATSPER4Q7RTX7 472 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 ABI1Q8IZP0 508 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 ADAMTS19Q8TE59 1207 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms