RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
ABCD4-226ENST00000556971 GPCPD1Q9NPB8 672 aa14.21□□□□□ -0.13
ABCD4-226ENST00000556971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.13
ABCD4-226ENST00000556971 TRPV2Q9Y5S1 764 aa14.21□□□□□ -0.13
ABCD4-226ENST00000556971 IRAK3Q9Y616 596 aa14.21□□□□□ -0.13
ABCD4-226ENST00000556971 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 DENND3A2RUS2 1198 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 EIF3JO75822 258 aaKnown RBP14.2□□□□□ -0.14
ABCD4-226ENST00000556971 KLRC2P26717 231 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 NFX1Q12986 1120 aaKnown RBP14.2□□□□□ -0.14
ABCD4-226ENST00000556971 GIT2Q14161 759 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 MAMSTRQ6ZN01 415 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
ABCD4-226ENST00000556971 SYTL5Q8TDW5 730 aaPredicted RBP14.2□□□□□ -0.14
ABCD4-226ENST00000556971 ZBTB10Q96DT7 871 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 TMEM169Q96HH4 297 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 CASD1Q96PB1 797 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 IWS1Q96ST2 819 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 ADAM2Q99965 735 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 IER2Q9BTL4 223 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 TUBE1Q9UJT0 475 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 ZNF215Q9UL58 517 aaPredicted RBP14.2□□□□□ -0.14
ABCD4-226ENST00000556971 SQORQ9Y6N5 450 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 DOCK6Q96HP0 2047 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
ABCD4-226ENST00000556971 DOCK5Q9H7D0 1870 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 FAM221BA6H8Z2 402 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 C9IYK1 514 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
ABCD4-226ENST00000556971 RFPL2O75678 378 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 RAP1GAPP47736 663 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 SIM1P81133 766 aaPredicted RBP14.19□□□□□ -0.14
ABCD4-226ENST00000556971 TTF1Q15361 905 aaPredicted RBP14.19□□□□□ -0.14
ABCD4-226ENST00000556971 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
ABCD4-226ENST00000556971 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 KBTBD6Q86V97 674 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 TMEM173Q86WV6 379 aaPredicted RBP14.19□□□□□ -0.14
ABCD4-226ENST00000556971 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 HEBP1Q9NRV9 189 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 C1orf112Q9NSG2 853 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 PCDHGA5Q9Y5G8 931 aa14.19□□□□□ -0.14
ABCD4-226ENST00000556971 MYH7P12883 1935 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 LNP1A1A4G5 178 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 HOXC13P31276 330 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 UAP1L1Q3KQV9 507 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 USH1GQ495M9 461 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 SLC24A5Q71RS6 500 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 ZNF687Q8N1G0 1237 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 SSH1Q8WYL5 1049 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 GPKOWQ92917 476 aaPredicted RBP eCLIP14.18□□□□□ -0.142e-6■■■■■ 39.1
ABCD4-226ENST00000556971 KXD1Q9BQD3 176 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 RNF19AQ9NV58 838 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 TMEM161AQ9NX61 479 aa14.18□□□□□ -0.14
ABCD4-226ENST00000556971 K7ESF4 209 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 M0QZ92 97 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 NR3C2P08235 984 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 TSPY3P0CV98 308 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 TSPY8P0CW00 308 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 PPFIA1Q13136 1202 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 IER5Q5VY09 327 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 ZNF513Q8N8E2 541 aaPredicted RBP14.17□□□□□ -0.14
ABCD4-226ENST00000556971 PHKBQ93100 1093 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 PIDD1Q9HB75 910 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 RGS18Q9NS28 235 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 SMC4Q9NTJ3 1288 aa14.17□□□□□ -0.14
ABCD4-226ENST00000556971 CHGBP05060 677 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 CNPP09543 421 aaKnown RBP14.16□□□□□ -0.14
ABCD4-226ENST00000556971 GAS6Q14393 721 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 GRIK4Q16099 956 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 CACNA2D4Q7Z3S7 1137 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 ABI1Q8IZP0 508 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 ZNF707Q96C28 371 aaPredicted RBP14.16□□□□□ -0.14
ABCD4-226ENST00000556971 EAF2Q96CJ1 260 aaPredicted RBP14.16□□□□□ -0.14
ABCD4-226ENST00000556971 EMILIN2Q9BXX0 1053 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 RHOBTB2Q9BYZ6 727 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 LMAN1LQ9HAT1 526 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 TMEM9BQ9NQ34 198 aa14.16□□□□□ -0.14
ABCD4-226ENST00000556971 GOLIM4O00461 696 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 WISP1O95388 367 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
ABCD4-226ENST00000556971 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
ABCD4-226ENST00000556971 BCAR1P56945 870 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 CFHR1Q03591 330 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 BTNL9Q6UXG8 535 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 CYP26C1Q6V0L0 522 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 STX8Q9UNK0 236 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 TELO2Q9Y4R8 837 aa14.15□□□□□ -0.14
ABCD4-226ENST00000556971 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.15
ABCD4-226ENST00000556971 PLXNB3Q9ULL4 1909 aa14.14□□□□□ -0.15
ABCD4-226ENST00000556971 MBLAC1A4D2B0 266 aaPredicted RBP14.14□□□□□ -0.15
ABCD4-226ENST00000556971 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
ABCD4-226ENST00000556971 ALDH7A1P49419 539 aaKnown RBP14.14□□□□□ -0.15
ABCD4-226ENST00000556971 IGBP1P78318 339 aa14.14□□□□□ -0.15
ABCD4-226ENST00000556971 SBK1Q52WX2 424 aa14.14□□□□□ -0.15
ABCD4-226ENST00000556971 MARCH8Q5T0T0 291 aa14.14□□□□□ -0.15
ABCD4-226ENST00000556971 KCNV1Q6PIU1 500 aa14.14□□□□□ -0.15
ABCD4-226ENST00000556971 MTSS1LQ765P7 747 aa14.14□□□□□ -0.15
ABCD4-226ENST00000556971 WDR5BQ86VZ2 330 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms