RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MYH6P13533 1939 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 CCDC194A0A1B0GVG4 234 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 C9orf172C9J069 976 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 GCOM1H8Y6P7 765 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 ATP2A1O14983 1001 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 LILRB5O75023 590 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 POLR2MP0CAP2 368 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 XRCC5P13010 732 aaKnown RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 EIF2AK2P19525 551 aaKnown RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 HSD17B4P51659 736 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 RPS6P62753 249 aaKnown RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 CNTN2Q02246 1040 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 NONOQ15233 471 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 PTPAQ15257 358 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 LETM2Q2VYF4 491 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 TTC38Q5R3I4 469 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 ANO1Q5XXA6 986 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 RNF207Q6ZRF8 634 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 KRT25Q7Z3Z0 450 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 GPRC5AQ8NFJ5 357 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 CYP2W1Q8TAV3 490 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 CCDC12Q8WUD4 166 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-244ENST00000556898 NUDT8Q8WV74 236 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 TRAIPQ9BWF2 469 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 TMEM60Q9H2L4 133 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 ACAD9Q9H845 621 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 BRMS1Q9HCU9 246 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 CYP39A1Q9NYL5 469 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 RTEL1Q9NZ71 1219 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 MORF4L1Q9UBU8 362 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 RABGAP1Q9Y3P9 1069 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 SMCHD1A6NHR9 2005 aa6.02□□□□□ -1.45
ATXN3-244ENST00000556898 PFASO15067 1338 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 SLC37A4O43826 429 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 H2AFB1P0C5Y9 115 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 H2AFB2P0C5Z0 115 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MYCLP12524 364 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MARCKSP29966 332 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MCM4P33991 863 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MCM7P33993 719 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 GHRHRQ02643 423 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 TBC1D8BQ0IIM8 1120 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 STK38Q15208 465 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 NFKBIBQ15653 356 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 IL17AQ16552 155 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 HIF1AQ16665 826 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 LRRC26Q2I0M4 334 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 TKFCQ3LXA3 575 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 IER5Q5VY09 327 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 GALNT17Q6IS24 598 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 BRAPQ7Z569 592 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MCF2L2Q86YR7 1114 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 ANKRD35Q8N283 1001 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MB21D1Q8N884 522 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 C4orf32Q8N8J7 132 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 RGS22Q8NE09 1264 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 CHST13Q8NET6 341 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 BICD2Q8TD16 824 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 LEO1Q8WVC0 666 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 CRYGNQ8WXF5 182 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 VTI1AQ96AJ9 217 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 LENG1Q96BZ8 264 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 FGD4Q96M96 766 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 ZNF396Q96N95 335 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 CLIC6Q96NY7 704 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 MMP19Q99542 508 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 SSBP4Q9BWG4 385 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 IGFLR1Q9H665 355 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATXN3-244ENST00000556898 LMBRD1Q9NUN5 540 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 SLC6A14Q9UN76 642 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
ATXN3-244ENST00000556898 ZSWIM8A7E2V4 1837 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 FAM86B1E9PN63 330 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 SORBS3O60504 671 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 CCNT1O60563 726 aaKnown RBP6□□□□□ -1.45
ATXN3-244ENST00000556898 COBLO75128 1261 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 FAM86B2P0C5J1 330 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 ARP10275 920 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 PTGS1P23219 599 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 SREBF1P36956 1147 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 NASPP49321 788 aaPredicted RBP6□□□□□ -1.45
ATXN3-244ENST00000556898 AFF1P51825 1210 aaKnown RBP6□□□□□ -1.45
ATXN3-244ENST00000556898 KRT85P78386 507 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 MRPS9P82933 396 aaKnown RBP6□□□□□ -1.45
ATXN3-244ENST00000556898 ARHGAP4P98171 946 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 CACNB2Q08289 660 aaPredicted RBP6□□□□□ -1.45
ATXN3-244ENST00000556898 AP3B2Q13367 1082 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 PGM5Q15124 567 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 RILPL1Q5EBL4 403 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 SPECC1Q5M775 1068 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 TMEM63BQ5T3F8 832 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 CLEC17AQ6ZS10 378 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 CAPN12Q6ZSI9 719 aa6□□□□□ -1.45
ATXN3-244ENST00000556898 EEPD1Q7L9B9 569 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms