RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 UBE3AQ05086 875 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 DRP2Q13474 957 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 ECHDC2Q86YB7 292 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 PRSS33Q8NF86 280 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 HELQQ8TDG4 1101 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 CCDC12Q8WUD4 166 aaPredicted RBP16.7■□□□□ 0.26
CHD8-211ENST00000556833 NLRP7Q8WX94 980 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 MRPS27Q92552 414 aaKnown RBP16.7■□□□□ 0.26
CHD8-211ENST00000556833 CCDC136Q96JN2 1154 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 LARP6Q9BRS8 491 aaKnown RBP16.7■□□□□ 0.26
CHD8-211ENST00000556833 PHF7Q9BWX1 381 aaPredicted RBP16.7■□□□□ 0.26
CHD8-211ENST00000556833 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 ADAMTS10Q9H324 1103 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 UNC45AQ9H3U1 944 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 DISC1Q9NRI5 854 aa16.7■□□□□ 0.26
CHD8-211ENST00000556833 PRPF3O43395 683 aaKnown RBP16.69■□□□□ 0.26
CHD8-211ENST00000556833 EDIL3O43854 480 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 GAS7O60861 476 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
CHD8-211ENST00000556833 GNA11P29992 359 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 LRCH2Q5VUJ6 765 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
CHD8-211ENST00000556833 TMC7Q7Z402 723 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 LRRC43Q8N309 656 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 LINC01465Q8N7H1 131 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 FAM167AQ96KS9 214 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 SEPT9Q9UHD8 586 aaPredicted RBP16.69■□□□□ 0.26
CHD8-211ENST00000556833 CEP131Q9UPN4 1083 aa16.69■□□□□ 0.26
CHD8-211ENST00000556833 MAGEB2O15479 319 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 DTNBO60941 627 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 WEE2P0C1S8 567 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 TMOD1P28289 359 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 GPC3P51654 580 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 RCAN1P53805 252 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 FAM189BP81408 668 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 ANKRD54Q6NXT1 300 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 ZBTB33Q86T24 672 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 TEX2Q8IWB9 1127 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
CHD8-211ENST00000556833 PUF60Q9UHX1 559 aaKnown RBP16.68■□□□□ 0.26
CHD8-211ENST00000556833 MYO10Q9HD67 2058 aa16.68■□□□□ 0.26
CHD8-211ENST00000556833 TDP2O95551 362 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 EIF4BP23588 611 aaKnown RBP16.67■□□□□ 0.26
CHD8-211ENST00000556833 CIITAP33076 1130 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 VCPP55072 806 aaKnown RBP16.67■□□□□ 0.26
CHD8-211ENST00000556833 NLRP5P59047 1200 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 TBC1D8BQ0IIM8 1120 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 CBX2Q14781 532 aaPredicted RBP16.67■□□□□ 0.26
CHD8-211ENST00000556833 NTRK3Q16288 839 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 SYCE2Q6PIF2 218 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 SUGP1Q8IWZ8 645 aaKnown RBP16.67■□□□□ 0.26
CHD8-211ENST00000556833 CCDC148Q8NFR7 591 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 AUTS2Q8WXX7 1259 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 SUSD6Q92537 303 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 LPPQ93052 612 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 CDCA3Q99618 268 aaPredicted RBP16.67■□□□□ 0.26
CHD8-211ENST00000556833 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 ELAC1Q9H777 363 aaKnown RBP16.67■□□□□ 0.26
CHD8-211ENST00000556833 NRBP2Q9NSY0 501 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 FAM86C1Q9NVL1 165 aa16.67■□□□□ 0.26
CHD8-211ENST00000556833 NID2Q14112 1375 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 HOXA2O43364 376 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
CHD8-211ENST00000556833 SRGAP2BP0DMP2 458 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 DARSP14868 501 aaKnown RBP16.66■□□□□ 0.26
CHD8-211ENST00000556833 ATF7P17544 494 aaPredicted RBP16.66■□□□□ 0.26
CHD8-211ENST00000556833 HSPA4P34932 840 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 MIER3Q7Z3K6 550 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 TBCKQ8TEA7 893 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 AIFM3Q96NN9 605 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 S1PR5Q9H228 398 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 SPG21Q9NZD8 308 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 INPP5FQ9Y2H2 1132 aa16.66■□□□□ 0.26
CHD8-211ENST00000556833 A0A087WZ62 844 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 ZC3H11AO75152 810 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHD8-211ENST00000556833 PLCB3Q01970 1234 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 KRT17Q04695 432 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 STK3Q13188 491 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 MCTP2Q6DN12 878 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 TMEM173Q86WV6 379 aaPredicted RBP16.65■□□□□ 0.26
CHD8-211ENST00000556833 KSR1Q8IVT5 923 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 C12orf76Q8N812 135 aaPredicted RBP16.65■□□□□ 0.26
CHD8-211ENST00000556833 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 SLC5A5Q92911 643 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 FDXACB1Q9BRP7 624 aaPredicted RBP16.65■□□□□ 0.26
CHD8-211ENST00000556833 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
CHD8-211ENST00000556833 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 SMOC2Q9H3U7 446 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
CHD8-211ENST00000556833 LZTS1Q9Y250 596 aa16.65■□□□□ 0.26
CHD8-211ENST00000556833 MEIS3P2A8K0S8 358 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms