RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 RWDD3Q9Y3V2 267 aa8.25□□□□□ -1.09
SCFD1-222ENST00000556768 MTCH2Q9Y6C9 303 aa8.25□□□□□ -1.09
SCFD1-222ENST00000556768 STK36Q9NRP7 1315 aa8.25□□□□□ -1.09
SCFD1-222ENST00000556768 KIAA1217Q5T5P2 1943 aa8.25□□□□□ -1.09
SCFD1-222ENST00000556768 DENND3A2RUS2 1198 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PPP1R3GB7ZBB8 358 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 CCNT1O60563 726 aaKnown RBP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 RPS6KA5O75582 802 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 CD52P31358 61 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 MGAT3Q09327 533 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 TBC1D8BQ0IIM8 1120 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 SAFBQ15424 915 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 INF2Q27J81 1249 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 NEK8Q86SG6 692 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 KIAA0319LQ8IZA0 1049 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 SLC5A5Q92911 643 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 FAM20AQ96MK3 541 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 SCLT1Q96NL6 688 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PHF20Q9BVI0 1012 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 UPF2Q9HAU5 1272 aaKnown RBP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PADI3Q9ULW8 664 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 COG5Q9UP83 839 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 AKT3Q9Y243 479 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 IGSF9BQ9UPX0 1349 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 KRT2P35908 639 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 CRYBB1P53674 252 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 GRB10Q13322 594 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 BTG3Q14201 252 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 TCTN1Q2MV58 587 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 ARSIQ5FYB1 569 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PPP4R3AQ6IN85 833 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 EFCAB12Q6NXP0 572 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PIK3AP1Q6ZUJ8 805 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 EXOC8Q8IYI6 725 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PRR7Q8TB68 274 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 LRRN4Q8WUT4 740 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 HLA-CQ95604 372 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 GTF3C6Q969F1 213 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 LENG9Q96B70 501 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 ZBTB10Q96DT7 871 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 AIFM3Q96NN9 605 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 ASB2Q96Q27 587 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 JPH2Q9BR39 696 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-222ENST00000556768 LIMCH1Q9UPQ0 1083 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 PCDHB7Q9Y5E2 793 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 KDM3AQ9Y4C1 1321 aa8.24□□□□□ -1.09
SCFD1-222ENST00000556768 ADAMTS3O15072 1205 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 PSMD10O75832 226 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 TDP2O95551 362 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 RB1P06400 928 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-222ENST00000556768 SOX11P35716 441 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 PRKCEQ02156 737 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 KIZQ2M2Z5 673 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 XKR3Q5GH77 459 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 TMEM192Q8IY95 271 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 SLFN12Q8IYM2 578 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 NECAB1Q8N987 351 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 C11orf84Q9BUA3 381 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-222ENST00000556768 COL25A1Q9BXS0 654 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-222ENST00000556768 UNC45AQ9H3U1 944 aa8.23□□□□□ -1.09
SCFD1-222ENST00000556768 AGO3Q9H9G7 860 aaKnown RBP8.23□□□□□ -1.09
SCFD1-222ENST00000556768 TTC28Q96AY4 2481 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 M0R2N6 131 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 TBX3O15119 743 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 C22orf31O95567 290 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ATP4AP20648 1035 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 IBSPP21815 317 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 NLRP11P59045 1033 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 PSMC5P62195 406 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 GPM6BQ13491 265 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 GNL2Q13823 731 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ME3Q16798 604 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 TMEM266Q2M3C6 531 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 SLC24A5Q71RS6 500 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 OTUD6AQ7L8S5 288 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 GDPD5Q8WTR4 605 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 C17orf80Q9BSJ5 609 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 C1orf112Q9NSG2 853 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 SEPT9Q9UHD8 586 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ST3GAL5Q9UNP4 418 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 REV3LO60673 3130 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 EPOPA6NHQ4 379 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ZBTB42B2RXF5 422 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 H3BNC9 293 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ARHGEF15O94989 841 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 VTNP04004 478 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 P4HBP07237 508 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 EIF4BP23588 611 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 CTNNB1P35222 781 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 QARSP47897 775 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 SPOUT1Q5T280 376 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 PACS2Q86VP3 889 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 FAM184AQ8NB25 1140 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ETNPPLQ8TBG4 499 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms