RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 FGD4Q96M96 766 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 NECAB3Q96P71 396 aaPredicted RBP10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 KATNBL1Q9H079 304 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 GSX1Q9H4S2 264 aaPredicted RBP10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 STARD7Q9NQZ5 370 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 ARPP21Q9UBL0 812 aaPredicted RBP10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 PPM1HQ9ULR3 514 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 SYNPO2Q9UMS6 1093 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 SYNRGQ9UMZ2 1314 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 PRR19A6NJB7 356 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 ARVCFO00192 962 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 TMPRSS2O15393 492 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 ADCY6O43306 1168 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 ZBED4O75132 1171 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 CD4P01730 458 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 FOSL2P15408 326 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 SSTR4P31391 388 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 ASPAP45381 313 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 OAZ1P54368 228 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 SNRNP48Q6IEG0 339 aaKnown RBP10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 SLC43A3Q8NBI5 491 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 PCSK9Q8NBP7 692 aaKnown RBP10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 KCNB2Q92953 911 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 OSBP2Q969R2 916 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 CHMP4BQ9H444 224 aaKnown RBP10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 KRT82Q9NSB4 513 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 MTMR4Q9NYA4 1195 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 CLIP2Q9UDT6 1046 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 FEM1BQ9UK73 627 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 NAV1Q8NEY1 1877 aa10.65□□□□□ -0.7
GTF2A1-204ENST00000556268 PARP14Q460N5 1801 aa10.65□□□□□ -0.71
GTF2A1-204ENST00000556268 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 MROH7Q68CQ1 1323 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 WDR64B1ANS9 1081 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 ENC1O14682 589 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 ASGR1P07306 291 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 NFICP08651 508 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 USP17L7P0C7H9 530 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 NME2P22392 152 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 ARNTP27540 789 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 CD97P48960 835 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 DNAJC14Q6Y2X3 702 aaPredicted RBP10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 FBXL6Q8N531 539 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 FAM133AQ8N9E0 248 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 KBTBD3Q8NAB2 608 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 GMCL1P1Q8NEA9 526 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 GLT1D1Q96MS3 346 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 LRRCC1Q9C099 1032 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 SEMA6CQ9H3T2 930 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 ACSS3Q9H6R3 686 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 ECHDC1Q9NTX5 307 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 FAM8A1Q9UBU6 413 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 FBXO40Q9UH90 709 aa10.64□□□□□ -0.71
GTF2A1-204ENST00000556268 BAZ2AQ9UIF9 1905 aaKnown RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 MINDY4BA8MYZ0 360 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 RNF113AO15541 343 aaKnown RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 PLA2G6O60733 806 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 PRPF40AO75400 957 aaKnown RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 PPIGQ13427 754 aaKnown RBP eCLIP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 COL19A1Q14993 1142 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 FAM126BQ8IXS8 530 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 ZNF444Q8N0Y2 327 aaPredicted RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 SHISA5Q8N114 240 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 USP38Q8NB14 1042 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 APPBP2Q92624 585 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 CEP95Q96GE4 821 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 CEP44Q9C0F1 390 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 DCTPP1Q9H773 170 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 RAVER2Q9HCJ3 691 aaKnown RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 PCDHGC5Q9Y5F6 944 aa10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
GTF2A1-204ENST00000556268 A0A0U1RQG5 324 aaPredicted RBP10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 PAGE1O75459 146 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 MED26O95402 600 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 TTLL1O95922 423 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 F13BP05160 661 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 C6orf222P0C671 652 aaPredicted RBP10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 CSF2RAP15509 400 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 GNAT2P19087 354 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 GNA15P30679 374 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ID3Q02535 119 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 AKNAD1Q5T1N1 836 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ZNF365Q70YC5 407 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 NPAS4Q8IUM7 802 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 CCDC144CPQ8IYA2 1237 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 IFNL3Q8IZI9 196 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ANKRD35Q8N283 1001 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms