RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MMP3P08254 477 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
ATXN3-236ENST00000556220 WEE1P30291 646 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-236ENST00000556220 BMPR1AP36894 532 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 NBL1P41271 181 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 PLEKHG4Q58EX7 1191 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 NKAPLQ5M9Q1 402 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 ZSCAN25Q6NSZ9 544 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 CEP85Q6P2H3 762 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 CCDC62Q6P9F0 684 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 MSLNLQ96KJ4 702 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 MPHOSPH6Q99547 160 aaKnown RBP8.08□□□□□ -1.12
ATXN3-236ENST00000556220 HAUS7Q99871 368 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 RANBP17Q9H2T7 1088 aaKnown RBP8.08□□□□□ -1.12
ATXN3-236ENST00000556220 TPSG1Q9NRR2 321 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 CHD8Q9HCK8 2581 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 A0A0A0MRY4 1105 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 RSPH10B2B2RC85 870 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 B4DLN1 442 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 LINC01565O15544 149 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 MAP3K6O95382 1288 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 GH1P01241 217 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 RSPH10BP0C881 870 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 TSPY3P0CV98 308 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 TSPY8P0CW00 308 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 ATP5JP18859 108 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 NFKB1P19838 968 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 CALML3P27482 149 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 CTNNB1P35222 781 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 NDUFV1P49821 464 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 AFF1P51825 1210 aaKnown RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 MRPL12P52815 198 aaKnown RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 RRP1P56182 461 aaKnown RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 RPS6P62753 249 aaKnown RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 RAC1P63000 192 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 ZNF200P98182 395 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 TFAP4Q01664 338 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 COASYQ13057 564 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 DGKDQ16760 1214 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 LY6KQ17RY6 165 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 PSAPL1Q6NUJ1 521 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 SLC30A10Q6XR72 485 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 RNF207Q6ZRF8 634 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 FIBCD1Q8N539 461 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 SMRP1Q8NCR6 262 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 CLEC4DQ8WXI8 215 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 SEPT8Q92599 483 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 IL17RAQ96F46 866 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 C11orf84Q9BUA3 381 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 KATNAL1Q9BW62 490 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 PHF7Q9BWX1 381 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 SIP14410 1827 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 ACACBO00763 2458 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
ATXN3-236ENST00000556220 BAZ2AQ9UIF9 1905 aaKnown RBP8.07□□□□□ -1.12
ATXN3-236ENST00000556220 WDR87Q6ZQQ6 2873 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 CCER2I3L3R5 266 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 HAS3O00219 553 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-236ENST00000556220 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 ICAM3P32942 547 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 THPOP40225 353 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 IDH3AP50213 366 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-236ENST00000556220 ARHGAP1Q07960 439 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 CAMK1Q14012 370 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 KIAA0753Q2KHM9 967 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 BTNL9Q6UXG8 535 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 ADSSL1Q8N142 457 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 NUDT8Q8WV74 236 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 CLP1Q92989 425 aaKnown RBP8.06□□□□□ -1.12
ATXN3-236ENST00000556220 PPP2R3CQ969Q6 453 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 KIF1BPQ96EK5 621 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 RPGRIP1Q96KN7 1286 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 IFIH1Q9BYX4 1025 aaKnown RBP8.06□□□□□ -1.12
ATXN3-236ENST00000556220 INCENPQ9NQS7 918 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-236ENST00000556220 KLK14Q9P0G3 267 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 CLEC1BQ9P126 229 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 RWDD3Q9Y3V2 267 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 SPTBN2O15020 2390 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
ATXN3-236ENST00000556220 MYH8P13535 1937 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-236ENST00000556220 TANC1Q9C0D5 1861 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
ATXN3-236ENST00000556220 KRT37O76014 449 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 F2P00734 622 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 MMP1P03956 469 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 TDO2P48775 406 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 ARSDP51689 593 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms