RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, human

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB11-210	ENST00000556078	IMPDH2	P12268	514 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	MAP2K2	P36507	400 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	PPP2R5D	Q14738	602 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	LSM12	Q3MHD2	195 aa	Known RBP	4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	USP39	Q53GS9	565 aa	Known RBP	4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ADO	Q96SZ5	270 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	CSRNP2	Q9H175	543 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	PRO3102	Q9H379	93 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	WHRN	Q9P202	907 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ZNRF3	Q9ULT6	936 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	POLR3A	O14802	1390 aa	Predicted RBP	4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	MON2	Q7Z3U7	1717 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	NRXN2	Q9P2S2	1712 aa		4.24	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ACE	P12821	1306 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ALPK3	Q96L96	1907 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	NFAT5	O94916	1531 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	CNOT4	O95628	575 aa	Known RBP	4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	BHLHA9	Q7RTU4	235 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	MILR1	Q7Z6M3	343 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	CTU1	Q7Z7A3	348 aa	Known RBP	4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	DPF3	Q92784	378 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	NKD1	Q969G9	470 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	NT5C1A	Q9BXI3	368 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ZNF214	Q9UL59	606 aa	Predicted RBP	4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	CFAP54	Q96N23	3096 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	CCDC7	Q96M83	1385 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ANKRD26	Q9UPS8	1709 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ZFHX4	Q86UP3	3567 aa		4.23	□□□□□ -1.73
EFCAB11-210	ENST00000556078	USP34	Q70CQ2	3546 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	CA12	O43570	354 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	IL2RB	P14784	551 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	TCF3	P15923	654 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	EN2	P19622	333 aa	Predicted RBP	4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ITGAE	P38570	1179 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ECE1	P42892	770 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	GRB10	Q13322	594 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	UNC5A	Q6ZN44	842 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ARHGEF25	Q86VW2	580 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	LDLRAD3	Q86YD5	345 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	RIOX2	Q8IUF8	465 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	EXTL1	Q92935	676 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	GNRHR2	Q96P88	292 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	TMEM209	Q96SK2	561 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	MMP19	Q99542	508 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	MARCH2	Q9P0N8	246 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	VTI1B	Q9UEU0	232 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ZDHHC9	Q9Y397	364 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	PALLD	Q8WX93	1383 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	USP47	Q96K76	1375 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	ARFGEF2	Q9Y6D5	1785 aa		4.22	□□□□□ -1.73
EFCAB11-210	ENST00000556078	TTC28	Q96AY4	2481 aa		4.21	□□□□□ -1.73
EFCAB11-210	ENST00000556078	C5orf42	Q9H799	3197 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	VAMP4	O75379	141 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	THBD	P07204	575 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	HMGB1	P09429	215 aa	Known RBP	4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	GYS1	P13807	737 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	AMPD2	Q01433	879 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	DDR1	Q08345	913 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ITPK1	Q13572	414 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ZYX	Q15942	572 aa	Known RBP	4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	AGBL4	Q5VU57	503 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	MBLAC2	Q68D91	279 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	SYNE4	Q8N205	404 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	NEU4	Q8WWR8	484 aa	Predicted RBP	4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ZSWIM3	Q96MP5	696 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	HAUS7	Q99871	368 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	YIPF4	Q9BSR8	244 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	KLHL25	Q9H0H3	589 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	MRS2	Q9HD23	443 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	FAM86C1	Q9NVL1	165 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	SLC4A7	Q9Y6M7	1214 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ADGRB1	O14514	1584 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	BCOR	Q6W2J9	1755 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ZNF541	Q9H0D2	1346 aa		4.21	□□□□□ -1.74
EFCAB11-210	ENST00000556078	DCHS1	Q96JQ0	3298 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	C22orf46	C9J442	243 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	COMT	P21964	271 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	GUCY2C	P25092	1073 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	DGCR2	P98153	550 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	DPY19L1	Q2PZI1	675 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	MROH9	Q5TGP6	573 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	PCSK4	Q6UW60	755 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	DLK2	Q6UY11	383 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	RALYL	Q86SE5	291 aa	Known RBP	4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ARHGEF39	Q8N4T4	335 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ADCY4	Q8NFM4	1077 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	TOE1	Q96GM8	510 aa	Known RBP	4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	LMF1	Q96S06	567 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	GBP3	Q9H0R5	595 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	RNF186	Q9NXI6	227 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	CROT	Q9UKG9	612 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	ZNF652	Q9Y2D9	606 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	BAHCC1	Q9P281	2608 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	RNF123	Q5XPI4	1314 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	RPGRIP1L	Q68CZ1	1315 aa		4.2	□□□□□ -1.74
EFCAB11-210	ENST00000556078	COL4A5	P29400	1685 aa		4.19	□□□□□ -1.74
EFCAB11-210	ENST00000556078	U2SURP	O15042	1029 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms