RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 EIF4BP23588 611 aaKnown RBP22.23■■□□□ 1.15
PRKCH-219ENST00000555906 TBC1D8BQ0IIM8 1120 aa22.23■■□□□ 1.15
PRKCH-219ENST00000555906 TARBP2Q15633 366 aaKnown RBP22.23■■□□□ 1.15
PRKCH-219ENST00000555906 MIER3Q7Z3K6 550 aa22.23■■□□□ 1.15
PRKCH-219ENST00000555906 COLGALT1Q8NBJ5 622 aa22.23■■□□□ 1.15
PRKCH-219ENST00000555906 ETNPPLQ8TBG4 499 aa22.23■■□□□ 1.15
PRKCH-219ENST00000555906 GJA10Q969M2 543 aa22.23■■□□□ 1.15
PRKCH-219ENST00000555906 MSLNLQ96KJ4 702 aa22.23■■□□□ 1.15
PRKCH-219ENST00000555906 NONOQ15233 471 aaKnown RBP eCLIP22.22■■□□□ 1.15
PRKCH-219ENST00000555906 AIFM3Q96NN9 605 aa22.22■■□□□ 1.15
PRKCH-219ENST00000555906 TMEM117Q9H0C3 514 aa22.22■■□□□ 1.15
PRKCH-219ENST00000555906 CWH43Q9H720 699 aa22.22■■□□□ 1.15
PRKCH-219ENST00000555906 TLR9Q9NR96 1032 aa22.22■■□□□ 1.15
PRKCH-219ENST00000555906 HCSTQ9UBK5 93 aa22.22■■□□□ 1.15
PRKCH-219ENST00000555906 SEPT9Q9UHD8 586 aaPredicted RBP22.22■■□□□ 1.15
PRKCH-219ENST00000555906 FSD2A1L4K1 749 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 PRR33A8MZF0 331 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 DCXO43602 365 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 CDKL5O76039 1030 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 FGF18O76093 207 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 EYA4O95677 639 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 DARSP14868 501 aaKnown RBP22.21■■□□□ 1.15
PRKCH-219ENST00000555906 ZSCAN20P17040 1043 aaPredicted RBP22.21■■□□□ 1.15
PRKCH-219ENST00000555906 NRIP1P48552 1158 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 STK3Q13188 491 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 XKR3Q5GH77 459 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 KRT25Q7Z3Z0 450 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 THNSL1Q8IYQ7 743 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 LRRC43Q8N309 656 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 SCLT1Q96NL6 688 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 NIFKQ9BYG3 293 aaKnown RBP22.21■■□□□ 1.15
PRKCH-219ENST00000555906 PDRG1Q9NUG6 133 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 RNF19AQ9NV58 838 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 TYW1Q9NV66 732 aaKnown RBP22.21■■□□□ 1.15
PRKCH-219ENST00000555906 ARID2Q68CP9 1835 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 STK36Q9NRP7 1315 aa22.21■■□□□ 1.15
PRKCH-219ENST00000555906 GLP2RO95838 553 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 COASYQ13057 564 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 SMRP1Q8NCR6 262 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 NLRP7Q8WX94 980 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 FAM122AQ96E09 287 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 LARP6Q9BRS8 491 aaKnown RBP22.2■■□□□ 1.14
PRKCH-219ENST00000555906 CLEC1BQ9P126 229 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 DDX25Q9UHL0 483 aaKnown RBP22.2■■□□□ 1.14
PRKCH-219ENST00000555906 LZTS1Q9Y250 596 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 PCDHGC5Q9Y5F6 944 aa22.2■■□□□ 1.14
PRKCH-219ENST00000555906 MTERF2Q49AM1 385 aa22.19■■□□□ 1.14
PRKCH-219ENST00000555906 PDE12Q6L8Q7 609 aaKnown RBP22.19■■□□□ 1.14
PRKCH-219ENST00000555906 ECHDC2Q86YB7 292 aa22.19■■□□□ 1.14
PRKCH-219ENST00000555906 ABI1Q8IZP0 508 aa22.19■■□□□ 1.14
PRKCH-219ENST00000555906 CASD1Q96PB1 797 aa22.19■■□□□ 1.14
PRKCH-219ENST00000555906 CEP89Q96ST8 783 aa22.19■■□□□ 1.14
PRKCH-219ENST00000555906 CDCA3Q99618 268 aaPredicted RBP22.19■■□□□ 1.14
PRKCH-219ENST00000555906 TRIOO75962 3097 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 IGKV6-21A0A0C4DH24 114 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 FSCN2O14926 492 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 SLC37A4O43826 429 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 STBD1O95210 358 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 PPM1AP35813 382 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 CDC42EP1Q00587 391 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 SCRN1Q12765 414 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 DRP2Q13474 957 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 INF2Q27J81 1249 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 ZNF668Q96K58 619 aaPredicted RBP22.18■■□□□ 1.14
PRKCH-219ENST00000555906 PHF20Q9BVI0 1012 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 TLE6Q9H808 572 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 DACT1Q9NYF0 836 aa22.18■■□□□ 1.14
PRKCH-219ENST00000555906 A0A0U1RQF3 1178 aa22.17■■□□□ 1.14
PRKCH-219ENST00000555906 GCFC2P16383 781 aaKnown RBP22.17■■□□□ 1.14
PRKCH-219ENST00000555906 PLCB3Q01970 1234 aa22.17■■□□□ 1.14
PRKCH-219ENST00000555906 DUSP6Q16828 381 aa22.17■■□□□ 1.14
PRKCH-219ENST00000555906 RBM23Q86U06 439 aaKnown RBP22.17■■□□□ 1.14
PRKCH-219ENST00000555906 MRPS27Q92552 414 aaKnown RBP22.17■■□□□ 1.14
PRKCH-219ENST00000555906 GCOM2Q9BZD3 368 aaPredicted RBP22.17■■□□□ 1.14
PRKCH-219ENST00000555906 BARX2Q9UMQ3 279 aaPredicted RBP22.17■■□□□ 1.14
PRKCH-219ENST00000555906 KCNJ14Q9UNX9 436 aa22.17■■□□□ 1.14
PRKCH-219ENST00000555906 MUC6Q6W4X9 2439 aa22.17■■□□□ 1.14
PRKCH-219ENST00000555906 CCDC194A0A1B0GVG4 234 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 TMEM150BA6NC51 233 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 XBP1P17861 261 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 ERVFC1P60507 584 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 PSMC5P62195 406 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 PPP2R5CQ13362 524 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 LETM2Q2VYF4 491 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 CLLU1OSQ5K130 101 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 LRRC55Q6ZSA7 311 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 ZNF598Q86UK7 904 aaKnown RBP22.16■■□□□ 1.14
PRKCH-219ENST00000555906 ZNF410Q86VK4 478 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 MICAL1Q8TDZ2 1067 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 RSPH1Q8WYR4 309 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 ZNF558Q96NG5 402 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 SLKQ9H2G2 1235 aaPredicted RBP22.16■■□□□ 1.14
PRKCH-219ENST00000555906 KCNMB3Q9NPA1 279 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 VAV3Q9UKW4 847 aa22.16■■□□□ 1.14
PRKCH-219ENST00000555906 EOMESO95936 686 aa22.15■■□□□ 1.14
PRKCH-219ENST00000555906 ATF7P17544 494 aaPredicted RBP22.15■■□□□ 1.14
PRKCH-219ENST00000555906 FGFR4P22455 802 aa22.15■■□□□ 1.14
PRKCH-219ENST00000555906 SFPQP23246 707 aaKnown RBP eCLIP22.15■■□□□ 1.14
PRKCH-219ENST00000555906 DNM2P50570 870 aa22.15■■□□□ 1.14
PRKCH-219ENST00000555906 PPP4R3AQ6IN85 833 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms