RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 DACT1Q9NYF0 836 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 LRFN2Q9ULH4 789 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 ST3GAL5Q9UNP4 418 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 DNM3Q9UQ16 869 aa25.47■■□□□ 1.67
CDKN3-208ENST00000555837 NOC2LQ9Y3T9 749 aaKnown RBP25.47■■□□□ 1.67
CDKN3-208ENST00000555837 ARHGEF35A5YM69 484 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 TMEM150BA6NC51 233 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 PBX2P40425 430 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 RABGGTBP53611 331 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.46■■□□□ 1.67
CDKN3-208ENST00000555837 FERMT3Q86UX7 667 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 SH2D3AQ9BRG2 576 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 NKX2-4Q9H2Z4 354 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 ERVK-5Q9HDB9 667 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 CHST12Q9NRB3 414 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 MTMR10Q9NXD2 777 aa25.46■■□□□ 1.67
CDKN3-208ENST00000555837 MED24O75448 989 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 SLC34A2O95436 690 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 POU5F1BQ06416 359 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 SLC24A5Q71RS6 500 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 SRGAP1Q7Z6B7 1085 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 PIGOQ8TEQ8 1089 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 SAMD11Q96NU1 681 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 GAS2L1Q99501 681 aaPredicted RBP25.45■■□□□ 1.66
CDKN3-208ENST00000555837 MICAL3Q7RTP6 2002 aa25.45■■□□□ 1.66
CDKN3-208ENST00000555837 VWA3AA6NCI4 1184 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 CA3P07451 260 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 SKIP12755 728 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 LONP1P36776 959 aaKnown RBP25.44■■□□□ 1.66
CDKN3-208ENST00000555837 PHKA2P46019 1235 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 NPAS4Q8IUM7 802 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 PRPF31Q8WWY3 499 aaKnown RBP25.44■■□□□ 1.66
CDKN3-208ENST00000555837 RSPH1Q8WYR4 309 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 NLRP4Q96MN2 994 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 ZNF396Q96N95 335 aaPredicted RBP25.44■■□□□ 1.66
CDKN3-208ENST00000555837 PPP1R16BQ96T49 567 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 RGS18Q9NS28 235 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 KCNG1Q9UIX4 513 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 MTMR6Q9Y217 621 aa25.44■■□□□ 1.66
CDKN3-208ENST00000555837 LAMA3Q16787 3333 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.43■■□□□ 1.66
CDKN3-208ENST00000555837 UPP2O95045 317 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 UBA7P41226 1012 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 HTRA4P83105 476 aaPredicted RBP25.43■■□□□ 1.66
CDKN3-208ENST00000555837 SF3A1Q15459 793 aaKnown RBP25.43■■□□□ 1.66
CDKN3-208ENST00000555837 FAM228AQ86W67 206 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 CALML4Q96GE6 196 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 CDHR5Q9HBB8 845 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 KIAA1024Q9UPX6 916 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 RWDD3Q9Y3V2 267 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 PCDHB7Q9Y5E2 793 aa25.43■■□□□ 1.66
CDKN3-208ENST00000555837 A0A087WZ62 844 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 HOXA2O43364 376 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 SARSP49591 514 aaKnown RBP25.42■■□□□ 1.66
CDKN3-208ENST00000555837 LAMTOR4Q0VGL1 99 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 RESTQ13127 1097 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 PPP2R5AQ15172 486 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 TCTN1Q2MV58 587 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 POTEGQ6S5H5 508 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 Q7L0L9 218 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 TMEM40Q8WWA1 233 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 TMEM143Q96AN5 459 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 ADAM2Q99965 735 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 FDXACB1Q9BRP7 624 aaPredicted RBP25.42■■□□□ 1.66
CDKN3-208ENST00000555837 DDX19AQ9NUU7 478 aaKnown RBP25.42■■□□□ 1.66
CDKN3-208ENST00000555837 STXBP5LQ9Y2K9 1186 aa25.42■■□□□ 1.66
CDKN3-208ENST00000555837 YBX2Q9Y2T7 364 aaKnown RBP25.42■■□□□ 1.66
CDKN3-208ENST00000555837 TXLNAP40222 546 aa25.41■■□□□ 1.66
CDKN3-208ENST00000555837 FAM117BQ6P1L5 589 aa25.41■■□□□ 1.66
CDKN3-208ENST00000555837 PADI6Q6TGC4 694 aa25.41■■□□□ 1.66
CDKN3-208ENST00000555837 FAM161BQ96MY7 647 aa25.41■■□□□ 1.66
CDKN3-208ENST00000555837 TIPINQ9BVW5 301 aa25.41■■□□□ 1.66
CDKN3-208ENST00000555837 TTYH1Q9H313 450 aaPredicted RBP25.41■■□□□ 1.66
CDKN3-208ENST00000555837 ELAC1Q9H777 363 aaKnown RBP25.41■■□□□ 1.66
CDKN3-208ENST00000555837 MORC2Q9Y6X9 1032 aaPredicted RBP25.41■■□□□ 1.66
CDKN3-208ENST00000555837 SIP14410 1827 aa25.41■■□□□ 1.66
CDKN3-208ENST00000555837 ZBTB39O15060 712 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 USO1O60763 962 aaKnown RBP25.4■■□□□ 1.66
CDKN3-208ENST00000555837 SRGAP2CP0DJJ0 459 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 DRP2Q13474 957 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 ATL3Q6DD88 541 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 CATSPER4Q7RTX7 472 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 ZNF579Q8NAF0 562 aaKnown RBP25.4■■□□□ 1.66
CDKN3-208ENST00000555837 RNF149Q8NC42 400 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 RASSF8Q8NHQ8 419 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 TGS1Q96RS0 853 aaKnown RBP25.4■■□□□ 1.66
CDKN3-208ENST00000555837 NFKBIZQ9BYH8 718 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 OSBPL7Q9BZF2 842 aa25.4■■□□□ 1.66
CDKN3-208ENST00000555837 LOXHD1Q8IVV2 1947 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 ERLIN2O94905 339 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 EYA4O95677 639 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 CYP11B2P19099 503 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 KIFAP3Q92845 792 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 IFT74Q96LB3 600 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 C2orf40Q9H1Z8 148 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 BHMT2Q9H2M3 363 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 KCND2Q9NZV8 630 aa25.39■■□□□ 1.66
CDKN3-208ENST00000555837 PHLPP2Q6ZVD8 1323 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 AXLP30530 894 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 ARL2P36404 184 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms