RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FBXW5Q969U6 566 aa5.24□□□□□ -1.57
SRP54-207ENST00000555535 MYEOVQ96EZ4 313 aa5.24□□□□□ -1.57
SRP54-207ENST00000555535 GPHA2Q96T91 129 aa5.24□□□□□ -1.57
SRP54-207ENST00000555535 RSAD1Q9HA92 442 aa5.24□□□□□ -1.57
SRP54-207ENST00000555535 CATSPERZQ9NTU4 200 aa5.24□□□□□ -1.57
SRP54-207ENST00000555535 RCAN3Q9UKA8 241 aa5.24□□□□□ -1.57
SRP54-207ENST00000555535 ONECUT2O95948 504 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 STAT3P40763 770 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 HDLBPQ00341 1268 aaKnown RBP5.23□□□□□ -1.57
SRP54-207ENST00000555535 NTRK3Q16288 839 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 PTRH1Q86Y79 214 aaKnown RBP5.23□□□□□ -1.57
SRP54-207ENST00000555535 PGBD4Q96DM1 585 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 RPL10LQ96L21 214 aaKnown RBP5.23□□□□□ -1.57
SRP54-207ENST00000555535 COQ10AQ96MF6 247 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 SPATA5L1Q9BVQ7 753 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 SAE1Q9UBE0 346 aaPredicted RBP5.23□□□□□ -1.57
SRP54-207ENST00000555535 ASB1Q9Y576 335 aa5.23□□□□□ -1.57
SRP54-207ENST00000555535 AQP7O14520 342 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 PRODHO43272 600 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 NAT1P18440 290 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 IFRD2Q12894 506 aaPredicted RBP5.22□□□□□ -1.57
SRP54-207ENST00000555535 TCIRG1Q13488 830 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 CRY1Q16526 586 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 PRR16Q569H4 304 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 NSMFQ6X4W1 530 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 C16orf59Q7L2K0 433 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 NT5DC4Q86YG4 428 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 ELOA2Q8IYF1 753 aaPredicted RBP5.22□□□□□ -1.57
SRP54-207ENST00000555535 CPT1CQ8TCG5 803 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 SORCS3Q9UPU3 1222 aa5.22□□□□□ -1.57
SRP54-207ENST00000555535 RBM8AQ9Y5S9 174 aaKnown RBP5.22□□□□□ -1.57
SRP54-207ENST00000555535 AMY2AP04746 511 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 PABPC1P11940 636 aaKnown RBP5.21□□□□□ -1.58
SRP54-207ENST00000555535 GNAT2P19087 354 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 AMY2BP19961 511 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 ZEB1P37275 1124 aaPredicted RBP5.21□□□□□ -1.58
SRP54-207ENST00000555535 C1QL3Q5VWW1 255 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 OSTM1Q86WC4 334 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 BCL6BQ8N143 479 aaPredicted RBP5.21□□□□□ -1.58
SRP54-207ENST00000555535 LCORLQ8N3X6 602 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 MB21D1Q8N884 522 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 SCARB1Q8WTV0 552 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 ST8SIA2Q92186 375 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 ARL8AQ96BM9 186 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 ZNF512Q96ME7 567 aaPredicted RBP5.21□□□□□ -1.58
SRP54-207ENST00000555535 SLC46A2Q9BY10 475 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 PRKAG3Q9UGI9 489 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 DENND2AQ9ULE3 1009 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 FRMD4BQ9Y2L6 1034 aa5.21□□□□□ -1.58
SRP54-207ENST00000555535 ADAM8P78325 824 aa5.2□□□□□ -1.58
SRP54-207ENST00000555535 IQSEC1Q6DN90 963 aa5.2□□□□□ -1.58
SRP54-207ENST00000555535 APBB1IPQ7Z5R6 666 aaPredicted RBP5.2□□□□□ -1.58
SRP54-207ENST00000555535 C9orf106Q8NAJ2 232 aa5.2□□□□□ -1.58
SRP54-207ENST00000555535 HIPK4Q8NE63 616 aa5.2□□□□□ -1.58
SRP54-207ENST00000555535 ASB15Q8WXK1 588 aa5.2□□□□□ -1.58
SRP54-207ENST00000555535 OSBP2Q969R2 916 aa5.2□□□□□ -1.58
SRP54-207ENST00000555535 MYADML2A6NDP7 307 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 SCAF4O95104 1147 aaKnown RBP5.19□□□□□ -1.58
SRP54-207ENST00000555535 JUNP05412 331 aaKnown RBP5.19□□□□□ -1.58
SRP54-207ENST00000555535 MMEP08473 750 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 VSIG10L2P0DP72 767 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 KRT15P19012 456 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 BLOC1S1P78537 153 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 FAM47CQ5HY64 1035 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 BOLLQ8N9W6 283 aaKnown RBP5.19□□□□□ -1.58
SRP54-207ENST00000555535 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 PRDM13Q9H4Q3 707 aa5.19□□□□□ -1.58
SRP54-207ENST00000555535 CENPVL1A0A0U1RR11 272 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 C2orf78A6NCI8 922 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 GJB6O95452 261 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 SSBP05455 408 aaKnown RBP eCLIP5.18□□□□□ -1.58
SRP54-207ENST00000555535 TYRP1P17643 537 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 METTL24Q5JXM2 366 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 KRT40Q6A162 431 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 MTDHQ86UE4 582 aaKnown RBP5.18□□□□□ -1.58
SRP54-207ENST00000555535 ARHGEF19Q8IW93 802 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 ANKS1AQ92625 1134 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 CAVIN3Q969G5 261 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 GBP4Q96PP9 640 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 ACBD3Q9H3P7 528 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 KCNH7Q9NS40 1196 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 KIAA1522Q9P206 1035 aaPredicted RBP5.18□□□□□ -1.58
SRP54-207ENST00000555535 INPP5FQ9Y2H2 1132 aa5.18□□□□□ -1.58
SRP54-207ENST00000555535 PRAMEF22A3QJZ6 481 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 ZNF561-AS1K7EIQ3 104 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 ZNF185O15231 689 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 FOXP2O15409 715 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 HKR1P10072 659 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 HOXB6P17509 224 aaKnown RBP5.17□□□□□ -1.58
SRP54-207ENST00000555535 ATF4P18848 351 aaPredicted RBP5.17□□□□□ -1.58
SRP54-207ENST00000555535 NPEPPSP55786 919 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 JAM2P57087 298 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
SRP54-207ENST00000555535 CCDC62Q6P9F0 684 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 SYBUQ9NX95 663 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 TESQ9UGI8 421 aaKnown RBP5.17□□□□□ -1.58
SRP54-207ENST00000555535 SFMBT1Q9UHJ3 866 aa5.17□□□□□ -1.58
SRP54-207ENST00000555535 TRAV20A0A0B4J274 112 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms