RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PTK7Q13308 1070 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 BFSP2Q13515 415 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 DHX8Q14562 1220 aaKnown RBP10.96□□□□□ -0.65
PSEN1-213ENST00000555386 IQCB1Q15051 598 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 EFCAB12Q6NXP0 572 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 OTUD6AQ7L8S5 288 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 CABP7Q86V35 215 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 SERINC5Q86VE9 423 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 C4orf19Q8IY42 314 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.65
PSEN1-213ENST00000555386 NEK9Q8TD19 979 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 EPSTI1Q96J88 318 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 BPIFA3Q9BQP9 254 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-213ENST00000555386 DNAJC25Q9H1X3 360 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 TUFT1Q9NNX1 390 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 FBXO2Q9UK22 296 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-213ENST00000555386 AKT3Q9Y243 479 aa10.96□□□□□ -0.65
PSEN1-213ENST00000555386 MYH11P35749 1972 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 FAM237AA0A1B0GTK4 181 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 USO1O60763 962 aaKnown RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 C22orf31O95567 290 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 VTNP04004 478 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 ACRP10323 421 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 CSF2RAP15509 400 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 RPA1P27694 616 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 HOXC8P31273 242 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 LONP1P36776 959 aaKnown RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 MAGEA10P43363 369 aaPredicted RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 POLGP54098 1239 aaPredicted RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 ADAM17P78536 824 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 NOLC1Q14978 699 aaKnown RBP eCLIP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 KARSQ15046 597 aaKnown RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 AXDND1Q5T1B0 1012 aaPredicted RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 MRFAP1L1Q96HT8 127 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 SCLT1Q96NL6 688 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 NACC1Q96RE7 527 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 MMTAG2Q9BU76 263 aaKnown RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 WNT8AQ9H1J5 351 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 POLD4Q9HCU8 107 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 CYP26B1Q9NR63 512 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 SRPRBQ9Y5M8 271 aaKnown RBP10.95□□□□□ -0.66
PSEN1-213ENST00000555386 COL1A2P08123 1366 aa10.95□□□□□ -0.66
PSEN1-213ENST00000555386 TANC1Q9C0D5 1861 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 ARHGEF35A5YM69 484 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 E9PMD0 336 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 NDUFA8P51970 172 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 DRP2Q13474 957 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 LRRC8DQ7L1W4 858 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 RSPH3Q86UC2 560 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 ELOA2Q8IYF1 753 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-213ENST00000555386 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
PSEN1-213ENST00000555386 TMEM143Q96AN5 459 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 CALML4Q96GE6 196 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 NIFKQ9BYG3 293 aaKnown RBP10.94□□□□□ -0.66
PSEN1-213ENST00000555386 TRIM5Q9C035 493 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 KIAA1468Q9P260 1216 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 DNM3Q9UQ16 869 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 PCDHA2Q9Y5H9 948 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 MORC2Q9Y6X9 1032 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-213ENST00000555386 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 TRIOBPQ9H2D6 2365 aa10.94□□□□□ -0.66
PSEN1-213ENST00000555386 MBLAC1A4D2B0 266 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 BECN2A8MW95 431 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 RSPH10B2B2RC85 870 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 M0QZ92 97 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 MAGEB2O15479 319 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 IQCF3P0C7M6 154 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 RSPH10BP0C881 870 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 SELPP16109 830 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 TMOD1P28289 359 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 FPGSQ05932 587 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 GRB10Q13322 594 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 EMC2Q15006 297 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 TARBP2Q15633 366 aaKnown RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 KIZQ2M2Z5 673 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 TRIM71Q2Q1W2 868 aaKnown RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 MFSD5Q6N075 450 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 TAF2Q6P1X5 1199 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 KCNK18Q7Z418 384 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 KIAA0319LQ8IZA0 1049 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 TMEM199Q8N511 208 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 PDILTQ8N807 584 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 CAGE1Q8TC20 777 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 KIAA1524Q8TCG1 905 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 SLC7A3Q8WY07 619 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 AK8Q96MA6 479 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 PNMA5Q96PV4 448 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 BHMT2Q9H2M3 363 aa10.93□□□□□ -0.66
PSEN1-213ENST00000555386 SUCLA2Q9P2R7 463 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-213ENST00000555386 CDY2AQ9Y6F7 541 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms