RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 DKC1O60832 514 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FOSL2P15408 326 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FGFR4P22455 802 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 IGFBP4P22692 258 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 TRAPPC10P48553 1259 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GPC3P51654 580 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PTGDRQ13258 359 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 IL17AQ16552 155 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 CATSPER3Q86XQ3 398 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PIGOQ8TEQ8 1089 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 TMEM143Q96AN5 459 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 MYO9BQ13459 2157 aa13.89□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PRUNE2Q8WUY3 3088 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GPR182O15218 404 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 MED24O75448 989 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DNM2P50570 870 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 CRIPAKQ8N1N5 446 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PPM1EQ8WY54 764 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ADAM2Q99965 735 aa13.88□□□□□ -0.19
TRAPPC6B-205ENST00000555269 A0A087WZ62 844 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 LYPLA2O95372 231 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DARSP14868 501 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 POLGP54098 1239 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ORC2Q13416 577 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ECM1Q16610 540 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 MAFAQ8NHW3 353 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PRPF31Q8WWY3 499 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FDXACB1Q9BRP7 624 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 C17orf80Q9BSJ5 609 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FTHL17Q9BXU8 183 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 A0A0C4DFX4 3053 aa13.87□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SRGAP2CP0DJJ0 459 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PYGBP11216 843 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 CDC25AP30304 524 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GATMP50440 423 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ERVK-21P61565 698 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DSC3Q14574 896 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GSE1Q14687 1217 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 POLR3CQ9BUI4 534 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 XPNPEP1Q9NQW7 623 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 RGS18Q9NS28 235 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ANKEF1Q9NU02 776 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GBF1Q92538 1859 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 WDR81Q562E7 1941 aa13.86□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PP2D1A8MPX8 630 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 K7ELQ4 463 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 LPXNO60711 386 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DGKIO75912 1065 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 RFC5P40937 340 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 RARRES1P49788 294 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FAM189BP81408 668 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 LAMTOR4Q0VGL1 99 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PDIA5Q14554 519 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 EMC2Q15006 297 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 RILPL1Q5EBL4 403 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 NEK9Q8TD19 979 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 JPH2Q9BR39 696 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GCOM2Q9BZD3 368 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 POLD4Q9HCU8 107 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 TUFT1Q9NNX1 390 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 LRWD1Q9UFC0 647 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 PCDHB7Q9Y5E2 793 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SIP14410 1827 aa13.85□□□□□ -0.19
TRAPPC6B-205ENST00000555269 VPS37CA5D8V6 355 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 C9IYK1 514 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SYT1P21579 422 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 RPA1P27694 616 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 CCT6AP40227 531 aaKnown RBP13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 SARSP49591 514 aaKnown RBP13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 GRB10Q13322 594 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 ODR4Q5SWX8 454 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 FAM102BQ5T8I3 360 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 POTEGQ6S5H5 508 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 DTHD1Q6ZMT9 781 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 NPAS4Q8IUM7 802 aa13.84□□□□□ -0.19
TRAPPC6B-205ENST00000555269 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms