RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HSPBAP1Q96EW2 488 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 TEKT5Q96M29 485 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 SGPP1Q9BX95 441 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 FTSJ1Q9UET6 329 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 TMPRSS11EQ9UL52 423 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 SYNPO2Q9UMS6 1093 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 A0A0A6YYJ9 748 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 GOLGA6CA6NDK9 693 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 GOLGA6BA6NDN3 693 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 KIF3BO15066 747 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 OPHN1O60890 802 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 IL18BPO95998 194 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 GOLGA6DP0CG33 693 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 PF4V1P10720 104 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 TAL1P17542 331 aaPredicted RBP7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 GPR15P49685 360 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 DLG4P78352 724 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 ODF1Q14990 250 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 MUM1Q2TAK8 710 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 WDR72Q3MJ13 1102 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 MBNL2Q5VZF2 373 aaKnown RBP7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 BMP8AQ7Z5Y6 402 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 STPG3Q8N7X2 389 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 JADE3Q92613 823 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 KCNN1Q92952 543 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 ZSWIM3Q96MP5 696 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 GCM1Q9NP62 436 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 KCND1Q9NSA2 647 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 GOLGA6AQ9NYA3 693 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 PRSS50Q9UI38 385 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 FBXO10Q9UK96 956 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHB6Q9Y5E3 794 aa7.11□□□□□ -1.27
CKS1BP1-201ENST00000555221 NRP2O60462 931 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 CUTAO60888 179 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 IL33O95760 270 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 OSMP13725 252 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 LGALS4P56470 323 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 PPARAQ07869 468 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 DGKDQ16760 1214 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 ANO4Q32M45 955 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 STK32CQ86UX6 486 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 LYSMD2Q8IV50 215 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 ZBTB8AQ96BR9 441 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 HIST1H2AHQ96KK5 128 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 SIGLEC10Q96LC7 697 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 HIST1H2AJQ99878 128 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 SYT3Q9BQG1 590 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 NOL10Q9BSC4 688 aaKnown RBP7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 CSRNP2Q9H175 543 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 KCNK12Q9HB15 430 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 IFT122Q9HBG6 1241 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 DPP7Q9UHL4 492 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 CROTQ9UKG9 612 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 USP18Q9UMW8 372 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 PMF1-BGLAPU3KQ54 211 aa7.1□□□□□ -1.27
CKS1BP1-201ENST00000555221 ATF3P18847 181 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 XPAP23025 273 aaPredicted RBP7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 CYP2C19P33261 490 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 LIMS1P48059 325 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 HTRA3P83110 453 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 CD83Q01151 205 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 TRIM25Q14258 630 aaKnown RBP7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 MLC1Q15049 377 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 PHF19Q5T6S3 580 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 GRAMD4Q6IC98 578 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 MAGEB6Q8N7X4 407 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 GAB3Q8WWW8 586 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 NOX5Q96PH1 765 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 NOB1Q9ULX3 412 aaKnown RBP7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 IRAK3Q9Y616 596 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 CDY2AQ9Y6F7 541 aa7.09□□□□□ -1.27
CKS1BP1-201ENST00000555221 H0Y858 1186 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 KNG1P01042 644 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 ADKP55263 362 aaKnown RBP7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 NRG3P56975 720 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 GTF2H3Q13889 308 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 OTOP2Q7RTS6 562 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 SLC41A1Q8IVJ1 513 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 MIER2Q8N344 545 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 PAWRQ96IZ0 340 aaKnown RBP7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 AIFM3Q96NN9 605 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 ACE2Q9BYF1 805 aaPredicted RBP7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 PRDM12Q9H4Q4 367 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 ZBTB21Q9ULJ3 1066 aa7.08□□□□□ -1.28
CKS1BP1-201ENST00000555221 PRC1O43663 620 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 NDUFS2O75306 463 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 C5AR1P21730 350 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 GLDCP23378 1020 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 AKAP5P24588 427 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 SMAD4Q13485 552 aaKnown RBP7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 RTP5Q14D33 572 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 GFOD2Q3B7J2 385 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 GLB1L2Q8IW92 636 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 TPH2Q8IWU9 490 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 TTC8Q8TAM2 541 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 TSPEARQ8WU66 669 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 FATE1Q969F0 183 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 DYDC2Q96IM9 177 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms