RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PDIK1LQ8N165 341 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 TMCO5AQ8N6Q1 288 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ZNF398Q8TD17 642 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PARD3BQ8TEW8 1205 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CCSER1Q9C0I3 900 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 MRPL47Q9HD33 250 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 DMGDHQ9UI17 866 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ATP11BQ9Y2G3 1177 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 SH3GLB1Q9Y371 365 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 TNKSO95271 1327 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 MROH5Q6ZUA9 1318 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CLTCL1P53675 1640 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 hCG_2014768A0A024R1R8 64 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ATP9AO75110 1047 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 RARGP13631 454 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 FBLN1P23142 703 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 GSTT1P30711 240 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PSMC2P35998 433 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ZAP70P43403 619 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 POLGP54098 1239 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ERVK-24P63145 666 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 TUBA4AP68366 448 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ATP2C1P98194 919 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PSMD6Q15008 389 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 RCN1Q15293 331 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 RABGAP1LQ5R372 815 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ARMCX6Q7L4S7 300 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PATL1Q86TB9 770 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 SETD3Q86TU7 594 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 KIAA2013Q8IYS2 634 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 KIRREL3Q8IZU9 778 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 AGAP11Q8TF27 550 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CASKIN2Q8WXE0 1202 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 HPS3Q969F9 1004 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 EDC3Q96F86 508 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 UNC45AQ9H3U1 944 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ARPP21Q9UBL0 812 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CAPN9O14815 690 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CLASP2O75122 1294 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 RHOBTB3O94955 611 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PRR29P0C7W0 189 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PDE6AP16499 860 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 VCAM1P19320 739 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 TTKP33981 857 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ALDH5A1P51649 535 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 PPARDQ03181 441 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ITGB3BPQ13352 177 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 B3GNT6Q6ZMB0 384 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ANKS1AQ92625 1134 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CCDC124Q96CT7 223 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 DCAF5Q96JK2 942 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CCDC85AQ96PX6 553 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 FNBP1Q96RU3 617 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 ZNF184Q99676 751 aaPredicted RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 VAT1LQ9HCJ6 419 aa6.86□□□□□ -1.31
PCNX1-207ENST00000554691 G3BP2Q9UN86 482 aaKnown RBP6.86□□□□□ -1.31
PCNX1-207ENST00000554691 CFAP69A5D8W1 941 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 KRT38O76015 456 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 KRT8P05787 483 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 MX2P20592 715 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 NR2F2P24468 414 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 HMOX2P30519 316 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 MLH1P40692 756 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 ARL4CP56559 192 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 ERMARDQ5T6L9 678 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 THEMIS2Q5TEJ8 643 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 SNX30Q5VWJ9 437 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 RNF43Q68DV7 783 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 CYP4F22Q6NT55 531 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 USHBP1Q8N6Y0 703 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 ATAD3AQ9NVI7 634 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 AMACRQ9UHK6 382 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 IGSF1Q8N6C5 1336 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 PCDH11YQ9BZA8 1340 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 KDM6AO15550 1401 aaPredicted RBP6.85□□□□□ -1.31
PCNX1-207ENST00000554691 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 COPEO14579 308 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 PJA2O43164 708 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 ZNF189O75820 626 aaPredicted RBP6.85□□□□□ -1.31
PCNX1-207ENST00000554691 CLPTM1O96005 669 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 HLA-DOAP06340 250 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 PLS3P13797 630 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 KPNA2P52292 529 aaKnown RBP6.85□□□□□ -1.31
PCNX1-207ENST00000554691 MFAP3P55082 362 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 YWHAEP62258 255 aaKnown RBP6.85□□□□□ -1.31
PCNX1-207ENST00000554691 ART3Q13508 389 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 RASGRF1Q13972 1273 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 MESDQ14696 234 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 DCUN1D2Q6PH85 259 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 OTUD6AQ7L8S5 288 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 ZNF554Q86TJ5 538 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 GPBP1Q86WP2 473 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 NELFCDQ8IXH7 590 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 KIF2BQ8N4N8 673 aa6.85□□□□□ -1.31
PCNX1-207ENST00000554691 SPATA5Q8NB90 893 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms