RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 PCYT2Q99447 389 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 PDCD2LQ9BRP1 358 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 OXCT2Q9BYC2 517 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 UNC45AQ9H3U1 944 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 EFCC1Q9HA90 598 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 PXMP2Q9NR77 195 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 PICK1Q9NRD5 415 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 DDX19AQ9NUU7 478 aaKnown RBP6.59□□□□□ -1.35
ATXN3-230ENST00000554673 KBTBD4Q9NVX7 518 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 RGL1Q9NZL6 768 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 AGTPBP1Q9UPW5 1226 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 DYRK1BQ9Y463 629 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 PCDHA2Q9Y5H9 948 aa6.59□□□□□ -1.35
ATXN3-230ENST00000554673 MYPNQ86TC9 1320 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 IQCA1LA6NCM1 817 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 SHISA8B8ZZ34 492 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 E9PMD0 336 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 ZNF862O60290 1169 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 NEMFO60524 1076 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 PGK2P07205 417 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 KCNA2P16389 499 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 EIF2AK2P19525 551 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 ATP4AP20648 1035 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 COL8A1P27658 744 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 GNA11P29992 359 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 TXKP42681 527 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 SYKP43405 635 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 AFMP43652 599 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 IREB2P48200 963 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 HTRA3P83110 453 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 GNL2Q13823 731 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 PRR16Q569H4 304 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 MOXD1Q6UVY6 613 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 OTOP1Q7RTM1 612 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 SAPCD2Q86UD0 394 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 RIOX2Q8IUF8 465 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 DAW1Q8N136 415 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 KIAA0895Q8NCT3 520 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 FERMT2Q96AC1 680 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 FIZ1Q96SL8 496 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 SPATC1LQ9H0A9 340 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 NUCKS1Q9H1E3 243 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 DDX25Q9UHL0 483 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 ISY1Q9ULR0 285 aaKnown RBP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-230ENST00000554673 GDAQ9Y2T3 454 aa6.58□□□□□ -1.36
ATXN3-230ENST00000554673 TRIP11Q15643 1979 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 RSPH10B2B2RC85 870 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CTSHP09668 335 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 SLFN14P0C7P3 912 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 RSPH10BP0C881 870 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 FCER1AP12319 257 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 ATP1A3P13637 1013 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 GNA15P30679 374 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 DNAJA1P31689 397 aaKnown RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 USP11P51784 963 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CASP5P51878 434 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 USP14P54578 494 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 IKQ13123 557 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CALCRLQ16602 461 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 GJC2Q5T442 439 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 ALG1LQ6GMV1 187 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 NSMFQ6X4W1 530 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 VSIG10LQ86VR7 867 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CATSPER3Q86XQ3 398 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 INPP4AQ96PE3 977 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 HSD17B14Q9BPX1 270 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 MXRA8Q9BRK3 442 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 RUSC1Q9BVN2 902 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 TNMDQ9H2S6 317 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 TSPY26PQ9H489 355 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 SH2D4AQ9H788 454 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 TTC12Q9H892 705 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 AS3MTQ9HBK9 375 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 AGO4Q9HCK5 861 aaKnown RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 PDGFCQ9NRA1 345 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 DISC1Q9NRI5 854 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 FLRT1Q9NZU1 646 aa6.57□□□□□ -1.36
ATXN3-230ENST00000554673 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
ATXN3-230ENST00000554673 CCL15-CCL14A0A0B4J2E2 113 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 GOLGA6L22H0YM25 854 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 GCOM1H8Y6P7 765 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 PPP1R12BO60237 982 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 SLITRK3O94933 977 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 EDN1P05305 212 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 POLR2MP0CAP2 368 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 ZNF18P17022 549 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 AMPD1P23109 780 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms