RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 NLRP11P59045 1033 aaKnown RBP11.93□□□□□ -0.5
SHMT2-215ENST00000554656 ERVFC1P60507 584 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 COASYQ13057 564 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 DRP2Q13474 957 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 CUL4AQ13619 759 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 EFCAB12Q6NXP0 572 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-215ENST00000554656 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 CASD1Q96PB1 797 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
SHMT2-215ENST00000554656 DISC1Q9NRI5 854 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 TMEM161AQ9NX61 479 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 KMT2EQ8IZD2 1858 aa11.93□□□□□ -0.5
SHMT2-215ENST00000554656 PER2O15055 1255 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 MAGEB2O15479 319 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 CHMP2AO43633 222 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 PSMD10O75832 226 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 TDP2O95551 362 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 ATF7P17544 494 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 FGFR4P22455 802 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 PBX3P40426 434 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 GPC3P51654 580 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 AKAP17AQ02040 695 aaKnown RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 UBE3AQ05086 875 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 KCNC3Q14003 757 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 TARBP2Q15633 366 aaKnown RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 HERC4Q5GLZ8 1057 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 CLLU1OSQ5K130 101 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 SPOUT1Q5T280 376 aaKnown RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 B3GNT9Q6UX72 402 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 HFE2Q6ZVN8 426 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 BICD2Q8TD16 824 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 INTS4Q96HW7 963 aaKnown RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 RIT2Q99578 217 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 ATP6V0A4Q9HBG4 840 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 TLR9Q9NR96 1032 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 AKT3Q9Y243 479 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 USP15Q9Y4E8 981 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-215ENST00000554656 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 PCDHB12Q9Y5F1 795 aa11.92□□□□□ -0.5
SHMT2-215ENST00000554656 GAS7O60861 476 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 CSDE1O75534 798 aaKnown RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 DARSP14868 501 aaKnown RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 EIF4BP23588 611 aaKnown RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 USP11P51784 963 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 DUSP6Q16828 381 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 ODR4Q5SWX8 454 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 LRCH2Q5VUJ6 765 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 FAM43BQ6ZT52 329 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 ZNF598Q86UK7 904 aaKnown RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 ECHDC2Q86YB7 292 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 THNSL1Q8IYQ7 743 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 ETNPPLQ8TBG4 499 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 MBOAT7Q96N66 472 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 MAP7D2Q96T17 732 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 TLE6Q9H808 572 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-215ENST00000554656 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 TCEAL9Q9UHQ7 104 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 CEP131Q9UPN4 1083 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
SHMT2-215ENST00000554656 CYP3A7-CYP3A51PA0A087WV96 503 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 LOC730098B7Z3J9 87 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 DTNBO60941 627 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 LAG3P18627 525 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 CYP3A7P24462 503 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 DDIT3P35638 169 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 JAK3P52333 1124 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 AK2P54819 239 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 NLRP5P59047 1200 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 Q4G0T1 1027 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 PLPP4Q5VZY2 271 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 DAGLBQ8NCG7 672 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 SUSD6Q92537 303 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 TMX3Q96JJ7 454 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 SH2D3AQ9BRG2 576 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 TEKT3Q9BXF9 490 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 PCDHA4Q9UN74 947 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 LZTS1Q9Y250 596 aa11.9□□□□□ -0.5
SHMT2-215ENST00000554656 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.51
SHMT2-215ENST00000554656 IGKV6-21A0A0C4DH24 114 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 SLC37A4O43826 429 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 SFNP31947 248 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 PLCB3Q01970 1234 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms