RNA–Protein interactions for RNA: ENST00000554343.1

LCN9-203, Transcript of lipocalin 9, humanhuman

TSL 3

Gene LCN9, Length 798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN9-203ENST00000554343 CLIC4Q9Y696 253 aa18.31■□□□□ 0.52
LCN9-203ENST00000554343 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
LCN9-203ENST00000554343 GJB5O95377 273 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 POU5F1BQ06416 359 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
LCN9-203ENST00000554343 ECM1Q16610 540 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 FAM173BQ6P4H8 233 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.3■□□□□ 0.52
LCN9-203ENST00000554343 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 RHPN2Q8IUC4 686 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 MCPH1Q8NEM0 835 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 PRPF31Q8WWY3 499 aaKnown RBP18.3■□□□□ 0.52
LCN9-203ENST00000554343 NLRP7Q8WX94 980 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 TOP1MTQ969P6 601 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 TMEM143Q96AN5 459 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 TIFAQ96CG3 184 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 ZNF396Q96N95 335 aaPredicted RBP18.3■□□□□ 0.52
LCN9-203ENST00000554343 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
LCN9-203ENST00000554343 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
LCN9-203ENST00000554343 ST3GAL5Q9UNP4 418 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 DNM3Q9UQ16 869 aa18.3■□□□□ 0.52
LCN9-203ENST00000554343 ARHGEF35A5YM69 484 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 PP2D1A8MPX8 630 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 EYA4O95677 639 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 F13A1P00488 732 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 CYP11B2P19099 503 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 CDC25AP30304 524 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 ARL2P36404 184 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 NASPP49321 788 aaPredicted RBP18.29■□□□□ 0.52
LCN9-203ENST00000554343 LAMTOR4Q0VGL1 99 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
LCN9-203ENST00000554343 SLC39A14Q15043 492 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 ATL3Q6DD88 541 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 SCLT1Q96NL6 688 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 USP28Q96RU2 1077 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 PPP1R16BQ96T49 567 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 RAD9AQ99638 391 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 TMX1Q9H3N1 280 aa18.29■□□□□ 0.52
LCN9-203ENST00000554343 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
LCN9-203ENST00000554343 SRPRBQ9Y5M8 271 aaKnown RBP18.29■□□□□ 0.52
LCN9-203ENST00000554343 A0A087WWV3 80 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 A0A087WZ62 844 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 PBX2P40425 430 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 UBA7P41226 1012 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 PADI6Q6TGC4 694 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 RTN4RL1Q86UN2 441 aaPredicted RBP18.28■□□□□ 0.52
LCN9-203ENST00000554343 MYOCDQ8IZQ8 938 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 FDXACB1Q9BRP7 624 aaPredicted RBP18.28■□□□□ 0.52
LCN9-203ENST00000554343 ZBED2Q9BTP6 218 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 C1orf112Q9NSG2 853 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 TTC3P53804 2025 aa18.28■□□□□ 0.52
LCN9-203ENST00000554343 TLL1O43897 1013 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 USO1O60763 962 aaKnown RBP18.27■□□□□ 0.52
LCN9-203ENST00000554343 SFPQP23246 707 aaKnown RBP eCLIP18.27■□□□□ 0.52
LCN9-203ENST00000554343 RABGGTBP53611 331 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 HTRA4P83105 476 aaPredicted RBP18.27■□□□□ 0.52
LCN9-203ENST00000554343 TFDP1Q14186 410 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 DSC3Q14574 896 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.52
LCN9-203ENST00000554343 CABP7Q86V35 215 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 IFNLR1Q8IU57 520 aaPredicted RBP18.27■□□□□ 0.52
LCN9-203ENST00000554343 KSR1Q8IVT5 923 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 LINC01599Q8WXQ3 324 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 PNMA5Q96PV4 448 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 BHMT2Q9H2M3 363 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 SLC28A3Q9HAS3 691 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 IFT122Q9HBG6 1241 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 RGS18Q9NS28 235 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 FBXO2Q9UK22 296 aaPredicted RBP18.27■□□□□ 0.52
LCN9-203ENST00000554343 YBX2Q9Y2T7 364 aaKnown RBP18.27■□□□□ 0.52
LCN9-203ENST00000554343 INSL6Q9Y581 213 aa18.27■□□□□ 0.52
LCN9-203ENST00000554343 PTPRSQ13332 1948 aa18.27■□□□□ 0.51
LCN9-203ENST00000554343 GRB10Q13322 594 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 CRIPAKQ8N1N5 446 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 DEFB123Q8N688 67 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 CDK5RAP3Q96JB5 506 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 ZNF668Q96K58 619 aaPredicted RBP18.26■□□□□ 0.51
LCN9-203ENST00000554343 NLRP4Q96MN2 994 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 NFKBIZQ9BYH8 718 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 CCSER1Q9C0I3 900 aa18.26■□□□□ 0.51
LCN9-203ENST00000554343 BMP2KQ9NSY1 1161 aaPredicted RBP18.26■□□□□ 0.51
LCN9-203ENST00000554343 GBF1Q92538 1859 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 E9PMD0 336 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 YEATS4O95619 227 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 BRD1O95696 1058 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 STAG3L1P0CL83 205 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 ZSCAN20P17040 1043 aaPredicted RBP18.25■□□□□ 0.51
LCN9-203ENST00000554343 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
LCN9-203ENST00000554343 PHKA2P46019 1235 aa18.25■□□□□ 0.51
LCN9-203ENST00000554343 SARSP49591 514 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms