RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
TMEM253-203ENST00000554329 NIFKQ9BYG3 293 aaKnown RBP12.98□□□□□ -0.33
TMEM253-203ENST00000554329 CYP26B1Q9NR63 512 aa12.98□□□□□ -0.33
TMEM253-203ENST00000554329 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
TMEM253-203ENST00000554329 INSL6Q9Y581 213 aa12.98□□□□□ -0.33
TMEM253-203ENST00000554329 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
TMEM253-203ENST00000554329 KDM3AQ9Y4C1 1321 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 DENND3A2RUS2 1198 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 PP2D1A8MPX8 630 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 TBX3O15119 743 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 MAGEB2O15479 319 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 POLGP54098 1239 aaPredicted RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 ECM1Q16610 540 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 NME8Q8N427 588 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
TMEM253-203ENST00000554329 MRPL42Q9Y6G3 142 aaKnown RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
TMEM253-203ENST00000554329 ADGRA3Q8IWK6 1321 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
TMEM253-203ENST00000554329 MAFO75444 373 aaPredicted RBP12.96□□□□□ -0.33
TMEM253-203ENST00000554329 OR52Z1P0C646 297 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 TMOD1P28289 359 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 CDC25AP30304 524 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 CTNNB1P35222 781 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 ERVK-21P61565 698 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 TFF2Q03403 129 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 BTG3Q14201 252 aaPredicted RBP12.96□□□□□ -0.33
TMEM253-203ENST00000554329 EMC2Q15006 297 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 IL17AQ16552 155 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 FERMT3Q86UX7 667 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.33
TMEM253-203ENST00000554329 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
TMEM253-203ENST00000554329 MINDY3Q9H8M7 445 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
TMEM253-203ENST00000554329 GPRC5CQ9NQ84 441 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 XPNPEP1Q9NQW7 623 aa12.96□□□□□ -0.33
TMEM253-203ENST00000554329 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 IGKV6-21A0A0C4DH24 114 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 H3BQV1 296 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 DGKIO75912 1065 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 LINC00271P0C7V0 271 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 SPATA31C1P0DKV0 1188 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 DARSP14868 501 aaKnown RBP12.95□□□□□ -0.34
TMEM253-203ENST00000554329 PBX3P40426 434 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 TMEM192Q8IY95 271 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 FIBCD1Q8N539 461 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 LPPQ93052 612 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 PCDHGC5Q9Y5F6 944 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 RALGAPA2Q2PPJ7 1873 aa12.95□□□□□ -0.34
TMEM253-203ENST00000554329 TCF20Q9UGU0 1960 aaKnown RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 TBKBP1A7MCY6 615 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 MEIS3P2A8K0S8 358 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 GPR182O15218 404 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 EIF4BP23588 611 aaKnown RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 PTGDRQ13258 359 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 GPM6BQ13491 265 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 DSC3Q14574 896 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 ZRSR1Q15695 479 aaKnown RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 FAM173BQ6P4H8 233 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 CATSPER3Q86XQ3 398 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 NPAS4Q8IUM7 802 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 CRIPAKQ8N1N5 446 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 PLIN2Q99541 437 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 HSD17B14Q9BPX1 270 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 RGS18Q9NS28 235 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 RNF19AQ9NV58 838 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 NOL7Q9UMY1 257 aaKnown RBP12.94□□□□□ -0.34
TMEM253-203ENST00000554329 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 COL4A3BPQ9Y5P4 624 aa12.94□□□□□ -0.34
TMEM253-203ENST00000554329 C9IYK1 514 aa12.93□□□□□ -0.34
TMEM253-203ENST00000554329 GRM6O15303 877 aa12.93□□□□□ -0.34
TMEM253-203ENST00000554329 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
TMEM253-203ENST00000554329 SARSP49591 514 aaKnown RBP12.93□□□□□ -0.34
TMEM253-203ENST00000554329 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
TMEM253-203ENST00000554329 LARP1BQ659C4 914 aaKnown RBP12.93□□□□□ -0.34
TMEM253-203ENST00000554329 CDR2LQ86X02 465 aaPredicted RBP12.93□□□□□ -0.34
TMEM253-203ENST00000554329 SLC7A3Q8WY07 619 aa12.93□□□□□ -0.34
TMEM253-203ENST00000554329 CPB2Q96IY4 423 aa12.93□□□□□ -0.34
TMEM253-203ENST00000554329 CCDC43Q96MW1 224 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms