RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CTTNQ14247 550 aaKnown RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 RTN4RL1Q86UN2 441 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 SLC17A8Q8NDX2 589 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 NLRP7Q8WX94 980 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 CEP170P1Q96L14 293 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 SH2D3AQ9BRG2 576 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 DHX33Q9H6R0 707 aaKnown RBP14.6□□□□□ -0.07
SHMT2-211ENST00000554310 RGS18Q9NS28 235 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 MTUS1Q9ULD2 1270 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
SHMT2-211ENST00000554310 DGKIO75912 1065 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 SLITRK3O94933 977 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 SARSP49591 514 aaKnown RBP14.59□□□□□ -0.07
SHMT2-211ENST00000554310 NPEPPSP55786 919 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 GRB10Q13322 594 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 NBR1Q14596 966 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 EMC2Q15006 297 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 ZNF174Q15697 407 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHMT2-211ENST00000554310 TPH2Q8IWU9 490 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 CRIPAKQ8N1N5 446 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 FIBCD1Q8N539 461 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 FBXO22Q8NEZ5 403 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 ERMNQ8TAM6 284 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 GDPD5Q8WTR4 605 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 ZNF689Q96CS4 500 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-211ENST00000554310 C17orf80Q9BSJ5 609 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 GCOM2Q9BZD3 368 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-211ENST00000554310 SUCLA2Q9P2R7 463 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-211ENST00000554310 RWDD3Q9Y3V2 267 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 KIAA1671Q9BY89 1806 aa14.59□□□□□ -0.07
SHMT2-211ENST00000554310 EYSQ5T1H1 3165 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 H3BQV1 296 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 RFXAPO00287 272 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 MGEA5O60502 916 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 LPXNO60711 386 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 SFPQP23246 707 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHMT2-211ENST00000554310 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 HAUS3Q68CZ6 603 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 SLC24A5Q71RS6 500 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 CMTR2Q8IYT2 770 aaKnown RBP14.58□□□□□ -0.08
SHMT2-211ENST00000554310 TCP11Q8WWU5 503 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 CCDC43Q96MW1 224 aaKnown RBP14.58□□□□□ -0.08
SHMT2-211ENST00000554310 ADAM2Q99965 735 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 INO80BQ9C086 356 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-211ENST00000554310 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 ANKEF1Q9NU02 776 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 LMCD1Q9NZU5 365 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 LRFN2Q9ULH4 789 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 MTCH2Q9Y6C9 303 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 TTC28Q96AY4 2481 aa14.58□□□□□ -0.08
SHMT2-211ENST00000554310 FNDC1Q4ZHG4 1894 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 A0A087WZ62 844 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 C9IYK1 514 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 LAD1O00515 517 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 BTG3Q14201 252 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 DSC3Q14574 896 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 EPC2Q52LR7 807 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 RILPL1Q5EBL4 403 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 PSPC1Q8WXF1 523 aaKnown RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 ZNF668Q96K58 619 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 NLRP4Q96MN2 994 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 MTRQ99707 1265 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 FDXACB1Q9BRP7 624 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-211ENST00000554310 COL4A3BPQ9Y5P4 624 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 BRWD1Q9NSI6 2320 aa14.57□□□□□ -0.08
SHMT2-211ENST00000554310 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 DGAT1O75907 488 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 XRCC6P12956 609 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHMT2-211ENST00000554310 TECP42680 631 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 TOB1P50616 345 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-211ENST00000554310 CUL4AQ13619 759 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 TMEM192Q8IY95 271 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 MICALL1Q8N3F8 863 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 CLP1Q92989 425 aaKnown RBP14.56□□□□□ -0.08
SHMT2-211ENST00000554310 POLR3CQ9BUI4 534 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-211ENST00000554310 RAB34Q9BZG1 259 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 ELAC1Q9H777 363 aaKnown RBP14.56□□□□□ -0.08
SHMT2-211ENST00000554310 ATP6V0A4Q9HBG4 840 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 TMEM161AQ9NX61 479 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 DACT1Q9NYF0 836 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 PCDHB7Q9Y5E2 793 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 STK24Q9Y6E0 443 aa14.56□□□□□ -0.08
SHMT2-211ENST00000554310 C5orf67F2Z3F1 127 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 H3BNC9 293 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-211ENST00000554310 ZBTB39O15060 712 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 HOXA2O43364 376 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 RB1P06400 928 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 LINC00271P0C7V0 271 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 SPATA31C1P0DKV0 1188 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 MUTP22033 750 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 RPA1P27694 616 aa14.55□□□□□ -0.08
SHMT2-211ENST00000554310 CTNNB1P35222 781 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms