RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 UBR2Q8IWV8 1755 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 CFAP54Q96N23 3096 aa2.79□□□□□ -1.96
PRPF39-205ENST00000554081 TET1Q8NFU7 2136 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ELP1O95163 1332 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 FAM86B1E9PN63 330 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PRRG1O14668 218 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 FOXP2O15409 715 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ADAMTS4O75173 837 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TBCAO75347 108 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 DDAH1O94760 285 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 FAM13AO94988 1023 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 LARGE1O95461 756 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ASGR2P07307 311 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 HOXC6P09630 235 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 FAM86B2P0C5J1 330 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 CPB1P15086 417 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TXLNAP40222 546 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 DRP2Q13474 957 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 SMC1AQ14683 1233 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ANKRD1Q15327 319 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ALX1Q15699 326 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 AMHR2Q16671 573 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 RARS2Q5T160 578 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 CES5AQ6NT32 575 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TREML4Q6UXN2 200 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 DTHD1Q6ZMT9 781 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 OTUD6AQ7L8S5 288 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 NELFCDQ8IXH7 590 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ABRAQ8N0Z2 381 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ANKLE1Q8NAG6 615 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 REPS2Q8NFH8 660 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ERMNQ8TAM6 284 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 POF1BQ8WVV4 589 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ING5Q8WYH8 240 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 WNT8BQ93098 351 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 HLA-CQ95604 372 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 CCDC127Q96BQ5 260 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ZFP42Q96MM3 310 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 MMS19Q96T76 1030 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 GDF15Q99988 308 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 MXRA8Q9BRK3 442 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 LZTS2Q9BRK4 669 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 LXNQ9BS40 222 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 NOC4LQ9BVI4 516 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PCIF1Q9H4Z3 704 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 AGO3Q9H9G7 860 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 CDHR5Q9HBB8 845 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TYW1Q9NV66 732 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 KCNG1Q9UIX4 513 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 LIMCH1Q9UPQ0 1083 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 YBX2Q9Y2T7 364 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 INSL6Q9Y581 213 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ARFGEF1Q9Y6D6 1849 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ASTN1O14525 1302 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 KDM3BQ7LBC6 1761 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TRANK1O15050 2925 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 MCM3APO60318 1980 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 GOLGA8IPA6NC78 632 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 GOLGA8JA6NMD2 632 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 K7ERI5 159 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 LGR5O75473 907 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 BRD1O95696 1058 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 STAG3L1P0CL83 205 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 DLATP10515 647 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 HSPA4P34932 840 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 USP8P40818 1118 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 OAZ1P54368 228 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 GJA9P57773 515 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ARHGAP1Q07960 439 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 STRN3Q13033 797 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 BIRC3Q13489 604 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 NECTIN1Q15223 517 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PTPROQ16827 1216 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 LMBRD2Q68DH5 695 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PTCRAQ6ISU1 281 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ZBTB8OSQ8IWT0 167 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 SCN4BQ8IWT1 228 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 FAM126BQ8IXS8 530 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 VPS52Q8N1B4 723 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PGBD3Q8N328 593 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 KLHL23Q8NBE8 558 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 ADAMTS19Q8TE59 1207 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PRPF31Q8WWY3 499 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 CALML4Q96GE6 196 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 SGSM3Q96HU1 749 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TGS1Q96RS0 853 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 IWS1Q96ST2 819 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 TCF25Q9BQ70 676 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 RAB34Q9BZG1 259 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 DDX19AQ9NUU7 478 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 PNMA2Q9UL42 364 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 NOC2LQ9Y3T9 749 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 STK24Q9Y6E0 443 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 MRPL42Q9Y6G3 142 aaKnown RBP2.78□□□□□ -1.96
PRPF39-205ENST00000554081 MUC3AQ02505 3323 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 SYNGAP1Q96PV0 1343 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 CHD7Q9P2D1 2997 aa2.78□□□□□ -1.96
PRPF39-205ENST00000554081 E9PMD0 336 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 ARHGAP33O14559 1287 aa2.78□□□□□ -1.97
PRPF39-205ENST00000554081 MEIS2O14770 477 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms