RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 LRRC55Q6ZSA7 311 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 RAB11FIP4Q86YS3 637 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 CCDC105Q8IYK2 499 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 ZNF713Q8N859 430 aaPredicted RBP8.77□□□□□ -1.01
ABCD4-220ENST00000553998 TMEM40Q8WWA1 233 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 CASD1Q96PB1 797 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 TMEM117Q9H0C3 514 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 AZI2Q9H6S1 392 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 ATP6V0A4Q9HBG4 840 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 JPH1Q9HDC5 661 aaPredicted RBP8.77□□□□□ -1.01
ABCD4-220ENST00000553998 RNF19AQ9NV58 838 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 HCSTQ9UBK5 93 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 SLC9A2Q9UBY0 812 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 SEC63Q9UGP8 760 aaKnown RBP8.77□□□□□ -1.01
ABCD4-220ENST00000553998 IRAK3Q9Y616 596 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 DMXL1Q9Y485 3027 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 NFASCO94856 1347 aa8.77□□□□□ -1.01
ABCD4-220ENST00000553998 DENND3A2RUS2 1198 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 C2orf71A6NGG8 1288 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 HOXA2O43364 376 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
ABCD4-220ENST00000553998 CLASP2O75122 1294 aaKnown RBP8.76□□□□□ -1.01
ABCD4-220ENST00000553998 KLRC1P26715 233 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 CRYBB1P53674 252 aaPredicted RBP8.76□□□□□ -1.01
ABCD4-220ENST00000553998 ACTR2P61160 394 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 CCT2P78371 535 aaKnown RBP8.76□□□□□ -1.01
ABCD4-220ENST00000553998 KRT17Q04695 432 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 SCRN1Q12765 414 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 NTRK3Q16288 839 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 ME3Q16798 604 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 KIAA1841Q6NSI8 718 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 TEX2Q8IWB9 1127 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 TRIM22Q8IYM9 498 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 TRAPPC12Q8WVT3 735 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 ZNF558Q96NG5 402 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 LARP6Q9BRS8 491 aaKnown RBP8.76□□□□□ -1.01
ABCD4-220ENST00000553998 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
ABCD4-220ENST00000553998 SMOC2Q9H3U7 446 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 PSTPIP2Q9H939 334 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 ENTPD7Q9NQZ7 604 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 KCNH7Q9NS40 1196 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 CDH22Q9UJ99 828 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 CNTNAP5Q8WYK1 1306 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 LOXHD1Q8IVV2 1947 aa8.76□□□□□ -1.01
ABCD4-220ENST00000553998 FRYLO94915 3013 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 PI15O43692 258 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 HBP1O60381 514 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 GPR32O75388 356 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 EOMESO95936 686 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 ASGR2P07307 311 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 FGFR1P11362 822 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 SP100P23497 879 aaPredicted RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 AKAP17AQ02040 695 aaKnown RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 STK3Q13188 491 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 ZNF484Q5JVG2 852 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 ATAT1Q5SQI0 421 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 ABHD15Q6UXT9 468 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 TMC7Q7Z402 723 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 FAM228AQ86W67 206 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 FAM177A1Q8N128 213 aaPredicted RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 SLC39A11Q8N1S5 342 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 SNX21Q969T3 373 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 RMDN1Q96DB5 314 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 RTP3Q9BQQ7 232 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 MXRA8Q9BRK3 442 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 LLPHQ9BRT6 129 aaKnown RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 NCOA5Q9HCD5 579 aaKnown RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 CYP26B1Q9NR63 512 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 DZANK1Q9NVP4 752 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 SPG21Q9NZD8 308 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 PCDHA6Q9UN73 950 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 PCDHA8Q9Y5H6 950 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 V9GY48 417 aaPredicted RBP8.75□□□□□ -1.01
ABCD4-220ENST00000553998 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
ABCD4-220ENST00000553998 COL1A2P08123 1366 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 MED19A0JLT2 244 aaPredicted RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 LARGE1O95461 756 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 ARP10275 920 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 SSRP1Q08945 709 aaKnown RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 ITGB3BPQ13352 177 aaPredicted RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 GIT2Q14161 759 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 ANGPT1Q15389 498 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 PFKFB3Q16875 520 aaPredicted RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 PPP1R18Q6NYC8 613 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 ZNF598Q86UK7 904 aaKnown RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 CMTR1Q8N1G2 835 aaKnown RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 LRRC43Q8N309 656 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 TDRD5Q8NAT2 981 aaKnown RBP8.74□□□□□ -1.01
ABCD4-220ENST00000553998 DTWD2Q8NBA8 298 aa8.74□□□□□ -1.01
ABCD4-220ENST00000553998 CYP2W1Q8TAV3 490 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms