RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 PRPF31Q8WWY3 499 aaKnown RBP10.39□□□□□ -0.75
CHD8-206ENST00000553870 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 CALML4Q96GE6 196 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 CDK5RAP3Q96JB5 506 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 USP28Q96RU2 1077 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 MMTAG2Q9BU76 263 aaKnown RBP10.39□□□□□ -0.75
CHD8-206ENST00000553870 OSBPL7Q9BZF2 842 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 CCSER1Q9C0I3 900 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 AGO3Q9H9G7 860 aaKnown RBP10.39□□□□□ -0.75
CHD8-206ENST00000553870 CDHR5Q9HBB8 845 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 CHST12Q9NRB3 414 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 KCNG1Q9UIX4 513 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 MSRAQ9UJ68 235 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 ST3GAL5Q9UNP4 418 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 GINS2Q9Y248 185 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 NOC2LQ9Y3T9 749 aaKnown RBP10.39□□□□□ -0.75
CHD8-206ENST00000553870 PCDHA11Q9Y5I1 949 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 ATP6V1DQ9Y5K8 247 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 COL4A3BPQ9Y5P4 624 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 EVPLQ92817 2033 aa10.39□□□□□ -0.75
CHD8-206ENST00000553870 SCN5AQ14524 2016 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 SOX1O00570 391 aaPredicted RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 YEATS4O95619 227 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 BRD1O95696 1058 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 SFPQP23246 707 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD8-206ENST00000553870 CD52P31358 61 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 ARL2P36404 184 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 LAMTOR4Q0VGL1 99 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 NFX1Q12986 1120 aaKnown RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 DRP2Q13474 957 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 STK38Q15208 465 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 ECM1Q16610 540 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 FAM173BQ6P4H8 233 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 PADI6Q6TGC4 694 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 CABP7Q86V35 215 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 IFNLR1Q8IU57 520 aaPredicted RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 KRI1Q8N9T8 703 aaKnown RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 LINC00301Q8NCQ3 95 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 TMEM40Q8WWA1 233 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 TOP1MTQ969P6 601 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 TMEM143Q96AN5 459 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 SCLT1Q96NL6 688 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 OSMRQ99650 979 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 TIPINQ9BVW5 301 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 NFKBIZQ9BYH8 718 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 TSPYL2Q9H2G4 693 aaPredicted RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 BHMT2Q9H2M3 363 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 ERVK-5Q9HDB9 667 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 XPNPEP1Q9NQW7 623 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 C1orf112Q9NSG2 853 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 DDX19AQ9NUU7 478 aaKnown RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 KCND2Q9NZV8 630 aa10.38□□□□□ -0.75
CHD8-206ENST00000553870 FBXO2Q9UK22 296 aaPredicted RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 RANBP2P49792 3224 aaKnown RBP10.38□□□□□ -0.75
CHD8-206ENST00000553870 A0A087WZ62 844 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 PP2D1A8MPX8 630 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 SPTLC2O15270 562 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 GJB5O95377 273 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 STAG3L1P0CL83 205 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 ZSCAN20P17040 1043 aaPredicted RBP10.37□□□□□ -0.75
CHD8-206ENST00000553870 MARCKSP29966 332 aaPredicted RBP10.37□□□□□ -0.75
CHD8-206ENST00000553870 CDC25AP30304 524 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 NUCB2P80303 420 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 FAM189BP81408 668 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 TCTN1Q2MV58 587 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 TMEM119Q4V9L6 283 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 FAM228AQ86W67 206 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 SYT2Q8N9I0 419 aaPredicted RBP10.37□□□□□ -0.75
CHD8-206ENST00000553870 KCNG4Q8TDN1 519 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 KIFAP3Q92845 792 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 RAD9AQ99638 391 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 FDXACB1Q9BRP7 624 aaPredicted RBP10.37□□□□□ -0.75
CHD8-206ENST00000553870 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 C17orf75Q9HAS0 396 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 IFT122Q9HBG6 1241 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 RGS18Q9NS28 235 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 CCDC39Q9UFE4 941 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 INSL6Q9Y581 213 aa10.37□□□□□ -0.75
CHD8-206ENST00000553870 A0A087WWV3 80 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 GRXCR1A8MXD5 290 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 E9PMD0 336 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 USO1O60763 962 aaKnown RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 SRGAP2CP0DJJ0 459 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 DNAJB2P25686 324 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 DDIT3P35638 169 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 TXLNAP40222 546 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 PHKA2P46019 1235 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 PTENP60484 403 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 DEFB103AP81534 67 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 CEBPZQ03701 1054 aaKnown RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 GRB10Q13322 594 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 PPP2R5AQ15172 486 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 ZNF697Q5TEC3 545 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms