RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 OR52Z1P0C646 297 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 TOB1P50616 345 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 POLGP54098 1239 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 ADAM2Q99965 735 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 DHX33Q9H6R0 707 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 RGS18Q9NS28 235 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 SUCLA2Q9P2R7 463 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 MGEA5O60502 916 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 DGKIO75912 1065 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 STAG3L1P0CL83 205 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 DARSP14868 501 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 POU3F3P20264 500 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 RFC5P40937 340 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 NBR1Q14596 966 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 SLC24A5Q71RS6 500 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 NPAS4Q8IUM7 802 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 C4orf32Q8N8J7 132 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 ZNF689Q96CS4 500 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 C1orf112Q9NSG2 853 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 PRRC2BQ5JSZ5 2229 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-208ENST00000553753 A0A087WZ62 844 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 GAS2O43903 313 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 SPATA31C1P0DKV0 1188 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 PTGDRQ13258 359 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 GRB10Q13322 594 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 CUL4AQ13619 759 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 RILPL1Q5EBL4 403 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 LARP1BQ659C4 914 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 CATSPER3Q86XQ3 398 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 KSR1Q8IVT5 923 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 FIBCD1Q8N539 461 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 PPM1EQ8WY54 764 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 FDXACB1Q9BRP7 624 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 C17orf80Q9BSJ5 609 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 GCOM2Q9BZD3 368 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 RC3H2Q9HBD1 1191 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 ADGRA3Q8IWK6 1321 aa11.4□□□□□ -0.58
HNRNPC-208ENST00000553753 C9IYK1 514 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 LPXNO60711 386 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.593e-6■□□□□ 10.7
HNRNPC-208ENST00000553753 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 BTG3Q14201 252 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 CCDC85BQ15834 202 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 EPC2Q52LR7 807 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 ERMNQ8TAM6 284 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 PRPF31Q8WWY3 499 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 PSPC1Q8WXF1 523 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 TMEM143Q96AN5 459 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 NLRP4Q96MN2 994 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 INO80BQ9C086 356 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 TUFT1Q9NNX1 390 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 LRFN2Q9ULH4 789 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 PCDHB7Q9Y5E2 793 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 COL4A3BPQ9Y5P4 624 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 MTCH2Q9Y6C9 303 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 MUC3AQ02505 3323 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 LAD1O00515 517 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 DGAT1O75907 488 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 IBSPP21815 317 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 FGFR4P22455 802 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 RPA1P27694 616 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 RARRES1P49788 294 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.594e-14■■■■□ 21.2
HNRNPC-208ENST00000553753 PDIA5Q14554 519 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 DSC3Q14574 896 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 EMC2Q15006 297 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 TMEM192Q8IY95 271 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 GDPD5Q8WTR4 605 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 TCP11Q8WWU5 503 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 CCDC43Q96MW1 224 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 MTRQ99707 1265 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 IFT122Q9HBG6 1241 aa11.39□□□□□ -0.59
HNRNPC-208ENST00000553753 COL4A6Q14031 1691 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 A0A087WWV3 80 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 ASAP2O43150 1006 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 MED24O75448 989 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 SRGAP2CP0DJJ0 459 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.599e-7■■■□□ 16.4
HNRNPC-208ENST00000553753 FAM189BP81408 668 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 LAMTOR4Q0VGL1 99 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 HAUS3Q68CZ6 603 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 FERMT3Q86UX7 667 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 MICALL1Q8N3F8 863 aa11.38□□□□□ -0.59
HNRNPC-208ENST00000553753 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms