RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ZC2HC1CQ53FD0 456 aaPredicted RBP15.17■□□□□ 0.02
APEX1-205ENST00000553555 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
APEX1-205ENST00000553555 CDKAL1Q5VV42 579 aa15.17■□□□□ 0.02
APEX1-205ENST00000553555 STXBP4Q6ZWJ1 553 aa15.17■□□□□ 0.02
APEX1-205ENST00000553555 NELFCDQ8IXH7 590 aa15.17■□□□□ 0.02
APEX1-205ENST00000553555 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
APEX1-205ENST00000553555 POLR3FQ9H1D9 316 aaPredicted RBP15.17■□□□□ 0.02
APEX1-205ENST00000553555 ST6GALNAC4Q9H4F1 302 aa15.17■□□□□ 0.02
APEX1-205ENST00000553555 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
APEX1-205ENST00000553555 PCDHB13Q9Y5F0 798 aa15.17■□□□□ 0.02
APEX1-205ENST00000553555 UBE4BO95155 1302 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 IGKV6-21A0A0C4DH24 114 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 PPP1R37O75864 691 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 ADCY5O95622 1261 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 HMGCRP04035 888 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
APEX1-205ENST00000553555 INSRRP14616 1297 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 CDK11BP21127 795 aaKnown RBP15.16■□□□□ 0.02
APEX1-205ENST00000553555 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
APEX1-205ENST00000553555 ARL2P36404 184 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 NCKAP1LP55160 1127 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 GJA9P57773 515 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 BEX3Q00994 111 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 LRRC63Q05C16 580 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 KNOP1Q1ED39 458 aaKnown RBP15.16■□□□□ 0.02
APEX1-205ENST00000553555 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 SPIRE2Q8WWL2 714 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 BSNDQ8WZ55 320 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 TMEM143Q96AN5 459 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 TSG101Q99816 390 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
APEX1-205ENST00000553555 WBP1LQ9NX94 342 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
APEX1-205ENST00000553555 COL1A2P08123 1366 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 K7ENM7 598 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 GAS2O43903 313 aaKnown RBP15.15■□□□□ 0.02
APEX1-205ENST00000553555 NPTX2P47972 431 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 SMTNP53814 917 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 FANCCQ00597 558 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 ALCAMQ13740 583 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 HSP90AA4PQ58FG1 418 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 HAUS6Q7Z4H7 955 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 CSGALNACT2Q8N6G5 542 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 NOC3LQ8WTT2 800 aaKnown RBP15.15■□□□□ 0.02
APEX1-205ENST00000553555 TRAPPC12Q8WVT3 735 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 KAT2BQ92831 832 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 IFT74Q96LB3 600 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 JPH2Q9BR39 696 aaPredicted RBP15.15■□□□□ 0.02
APEX1-205ENST00000553555 TRIM5Q9C035 493 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 UPF3AQ9H1J1 476 aaKnown RBP15.15■□□□□ 0.02
APEX1-205ENST00000553555 THAP9Q9H5L6 903 aa15.15■□□□□ 0.02
APEX1-205ENST00000553555 CCDC169A6NNP5 214 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 PDXKO00764 312 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 SLC16A4O15374 487 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 F2P00734 622 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 RARBP10826 455 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 ZNF75DP51815 510 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 NKX3-2P78367 333 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 GTF2BQ00403 316 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 KCNA1Q09470 495 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 DMP1Q13316 513 aaPredicted RBP15.14■□□□□ 0.01
APEX1-205ENST00000553555 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
APEX1-205ENST00000553555 FSCN1Q16658 493 aaKnown RBP15.14■□□□□ 0.01
APEX1-205ENST00000553555 IER5Q5VY09 327 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 IRF2BP1Q8IU81 584 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 KMT5AQ9NQR1 393 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 HAS3O00219 553 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 MAGEB2O15479 319 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 MYL3P08590 195 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 C6orf222P0C671 652 aaPredicted RBP15.14■□□□□ 0.01
APEX1-205ENST00000553555 GLRA2P23416 452 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 KSR1Q8IVT5 923 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 SLAIN1Q8ND83 568 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 TMEM161BQ8NDZ6 487 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 SUGCTQ9HAC7 445 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 SPC25Q9HBM1 224 aa15.14■□□□□ 0.01
APEX1-205ENST00000553555 TYW1Q9NV66 732 aaKnown RBP15.14■□□□□ 0.01
APEX1-205ENST00000553555 SIP14410 1827 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 MYADML2A6NDP7 307 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 TGFB1I1O43294 461 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 CALUO43852 315 aaPredicted RBP15.13■□□□□ 0.01
APEX1-205ENST00000553555 KPNA6O60684 536 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 C22orf31O95567 290 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 FGFR1OPO95684 399 aaKnown RBP15.13■□□□□ 0.01
APEX1-205ENST00000553555 SERPINC1P01008 464 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 KLRC1P26715 233 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 NAMPTP43490 491 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 PSEN2P49810 448 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 IGBP1P78318 339 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 FKBP3Q00688 224 aaKnown RBP15.13■□□□□ 0.01
APEX1-205ENST00000553555 SPAG1Q07617 926 aa15.13■□□□□ 0.01
APEX1-205ENST00000553555 CCDC173Q0VFZ6 552 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms