RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FRMD5Q7Z6J6 570 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 VSIG10LQ86VR7 867 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 C4orf19Q8IY42 314 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 CCDC170Q8IYT3 715 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ANKRD13AQ8IZ07 590 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 CPXCR1Q8N123 301 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 C17orf53Q8N3J3 647 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 TXLNBQ8N3L3 684 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 CYP2W1Q8TAV3 490 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 SCFD1Q8WVM8 642 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ATG4CQ96DT6 458 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 C16orf45Q96MC5 204 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 MPHOSPH6Q99547 160 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 REEP2Q9BRK0 252 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 SYT17Q9BSW7 474 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 TUBB2BQ9BVA1 445 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 BHMT2Q9H2M3 363 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 NDST4Q9H3R1 872 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 UNC45AQ9H3U1 944 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 PARVGQ9HBI0 331 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 TYW1Q9NV66 732 aaKnown RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 MYO1AQ9UBC5 1043 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 ZNF214Q9UL59 606 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-221ENST00000553498 PPP2R2CQ9Y2T4 447 aa8.06□□□□□ -1.12
ATXN3-221ENST00000553498 NFASCO94856 1347 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 LOC102724159A0A0B4J2E5 919 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 ARHGEF35A5YM69 484 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 IQCA1LA6NCM1 817 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 EML1O00423 815 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 TRAF5O00463 557 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 DHX15O43143 795 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 FAM13AO94988 1023 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 IPO7O95373 1038 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 ARP10275 920 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 FSHRP23945 695 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 KRT9P35527 623 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 HMGCS2P54868 508 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 ADKP55263 362 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 PSMC5P62195 406 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 TUBB4BP68371 445 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 KRT83P78385 493 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MRPS9P82933 396 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 HSP90AA2PQ14568 343 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 PWP2Q15269 919 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MEA1Q16626 185 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MUM1L1Q5H9M0 696 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MIIPQ5JXC2 388 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 SNRNP48Q6IEG0 339 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 RINT1Q6NUQ1 792 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MTERF4Q7Z6M4 381 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 ERO1BQ86YB8 467 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 FMNL3Q8IVF7 1028 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 TPH2Q8IWU9 490 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 GTF3C2Q8WUA4 911 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 SYN2Q92777 582 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 GJA10Q969M2 543 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 DYDC2Q96IM9 177 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 INPP4AQ96PE3 977 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 LXNQ9BS40 222 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MKNK1Q9BUB5 465 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 TTYH3Q9C0H2 523 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 KCTD10Q9H3F6 313 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 C17orf75Q9HAS0 396 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 ANKEF1Q9NU02 776 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 COL20A1Q9P218 1284 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 LARSQ9P2J5 1176 aaKnown RBP8.05□□□□□ -1.12
ATXN3-221ENST00000553498 SNCAIPQ9Y6H5 919 aa8.05□□□□□ -1.12
ATXN3-221ENST00000553498 MYH8P13535 1937 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 A0A0G2JLL6 359 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 PES1O00541 588 aaKnown RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 DDNO94850 711 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 SLC25A27O95847 323 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 UQCRHP07919 91 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 ICAM3P32942 547 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 CYLC1P35663 651 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 FXR1P51114 621 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 PSMC6P62333 389 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 CYP4A11Q02928 519 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 PPIL2Q13356 520 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 ADAM9Q13443 819 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 BAATQ14032 418 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 VGLL4Q14135 290 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 TMEM132BQ14DG7 1078 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 CCDC40Q4G0X9 1142 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 NSMFQ6X4W1 530 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 SLC30A10Q6XR72 485 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 FASTKD5Q7L8L6 764 aaKnown RBP8.04□□□□□ -1.12
ATXN3-221ENST00000553498 OTUD6AQ7L8S5 288 aa8.04□□□□□ -1.12
ATXN3-221ENST00000553498 HS2ST1Q7LGA3 356 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms