RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SELPP16109 830 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 LIG1P18858 919 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 GLRA2P23416 452 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 THPOP40225 353 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 GPC3P51654 580 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 BFSP2Q13515 415 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 IER5Q5VY09 327 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 CNNM4Q6P4Q7 775 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 GPBP1Q86WP2 473 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 KSR1Q8IVT5 923 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 EXOC8Q8IYI6 725 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 PRPF31Q8WWY3 499 aaKnown RBP16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 POLD4Q9HCU8 107 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 KCND2Q9NZV8 630 aa16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 SUCLA2Q9P2R7 463 aaPredicted RBP16.49■□□□□ 0.23
MTHFD1-204ENST00000553405 RSPH10B2B2RC85 870 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 NBNO60934 754 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 RSPH10BP0C881 870 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 SYKP43405 635 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 ZNF131P52739 623 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 UBE2HP62256 183 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 TMEM62Q0P6H9 643 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 LAMTOR4Q0VGL1 99 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 GIT2Q14161 759 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 TMEM40Q8WWA1 233 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 DPF3Q92784 378 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 PPP1R12CQ9BZL4 782 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 ZMYND8Q9ULU4 1186 aaPredicted RBP16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 CDY2AQ9Y6F7 541 aa16.48■□□□□ 0.23
MTHFD1-204ENST00000553405 FRMD3A2A2Y4 597 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 HIP1RO75146 1068 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 ZNF202O95125 648 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 CXCL10P02778 98 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 CTSHP09668 335 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 SYN1P17600 705 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 TMOD1P28289 359 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 CAPSQ13938 189 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 IFNLR1Q8IU57 520 aaPredicted RBP16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 TCP11Q8WWU5 503 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 STAMQ92783 540 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 SCLYQ96I15 445 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 CCDC43Q96MW1 224 aaKnown RBP16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 FIZ1Q96SL8 496 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 MAP7D2Q96T17 732 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 TIPINQ9BVW5 301 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 CELF4Q9BZC1 486 aaKnown RBP16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 MAGEF1Q9HAY2 307 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 PRDM5Q9NQX1 630 aaPredicted RBP16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 TRPV2Q9Y5S1 764 aa16.47■□□□□ 0.23
MTHFD1-204ENST00000553405 ADGRA3Q8IWK6 1321 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 NR1I2O75469 434 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 CCL23P55773 120 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 NLRP11P59045 1033 aaKnown RBP16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 MDM2Q00987 491 aaPredicted RBP16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 LPIN1Q14693 890 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 KIZQ2M2Z5 673 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 TCTN1Q2MV58 587 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 FBXO47Q5MNV8 452 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 CDCA2Q69YH5 1023 aaPredicted RBP16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 KRBA2Q6ZNG9 492 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 SV2BQ7L1I2 683 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 DDX12PQ92771 950 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 KIFAP3Q92845 792 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 C7orf25Q9BPX7 421 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 PYM1Q9BRP8 204 aaKnown RBP16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 TRIM9Q9C026 710 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 MINDY3Q9H8M7 445 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
MTHFD1-204ENST00000553405 LAMA2P24043 3122 aaKnown RBP16.45■□□□□ 0.22
MTHFD1-204ENST00000553405 RAG1P15918 1043 aa16.45■□□□□ 0.22
MTHFD1-204ENST00000553405 CASP1P29466 404 aa16.45■□□□□ 0.22
MTHFD1-204ENST00000553405 DNM2P50570 870 aa16.45■□□□□ 0.22
MTHFD1-204ENST00000553405 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
MTHFD1-204ENST00000553405 EPHB4P54760 987 aa16.45■□□□□ 0.22
MTHFD1-204ENST00000553405 POU5F1BQ06416 359 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms