RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 C12orf76Q8N812 135 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 MRPL43Q8N983 215 aaKnown RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 FEZF2Q8TBJ5 459 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 ADAMTS10Q9H324 1103 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 AKT3Q9Y243 479 aa10.31□□□□□ -0.76
SYNE2-209ENST00000553308 MAFBQ9Y5Q3 323 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 V9GY48 417 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-209ENST00000553308 CACNA1HO95180 2353 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 NT5C1B-RDH14C9J2C7 533 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 ADAMTS3O15072 1205 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 FGFR4P22455 802 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 NBL1P41271 181 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 ITIH3Q06033 890 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 RTN1Q16799 776 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 EFCAB12Q6NXP0 572 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 TEX2Q8IWB9 1127 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 TDRD5Q8NAT2 981 aaKnown RBP10.3□□□□□ -0.76
SYNE2-209ENST00000553308 HELQQ8TDG4 1101 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 AUTS2Q8WXX7 1259 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 TCEANC2Q96MN5 208 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 MAP7D2Q96T17 732 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF577Q9BSK1 485 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
SYNE2-209ENST00000553308 BARHL2Q9NY43 387 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
SYNE2-209ENST00000553308 USP34Q70CQ2 3546 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 MYH9P35579 1960 aaKnown RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 hCG_1984214I3L0E3 225 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 MAGEB2O15479 319 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 PSAPP07602 524 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 CYP3A4P08684 503 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ZSCAN20P17040 1043 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 EIF4BP23588 611 aaKnown RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 MTHFRP42898 656 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 BCAR1P56945 870 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 NECTIN1Q15223 517 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 CWF19L1Q69YN2 538 aaKnown RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 KIAA1841Q6NSI8 718 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF746Q6NUN9 644 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 SYNE3Q6ZMZ3 975 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF598Q86UK7 904 aaKnown RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 TMEM173Q86WV6 379 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF713Q8N859 430 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-209ENST00000553308 ZBP1Q9H171 429 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 CEP131Q9UPN4 1083 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 DENND4AQ7Z401 1863 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 MYO10Q9HD67 2058 aa10.29□□□□□ -0.76
SYNE2-209ENST00000553308 A0A0U1RQF3 1178 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ZBTB43O43298 467 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ZNF862O60290 1169 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ZC3H11AO75152 810 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 CSDE1O75534 798 aaKnown RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 CXCL14O95715 111 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 DARSP14868 501 aaKnown RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 EPCAMP16422 314 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 CDC27P30260 824 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 GPC3P51654 580 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 FRMD5Q7Z6J6 570 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 SMAP1Q8IYB5 467 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ZDHHC14Q8IZN3 488 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 VPS52Q8N1B4 723 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 TMEM169Q96HH4 297 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 FAM167AQ96KS9 214 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 SCLT1Q96NL6 688 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ESYT1Q9BSJ8 1104 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 MRPL9Q9BYD2 267 aaKnown RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 GLT8D2Q9H1C3 349 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 MFSD1Q9H3U5 465 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ANO2Q9NQ90 1003 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 TBC1D22BQ9NU19 505 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 TCEAL9Q9UHQ7 104 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 DBR1Q9UK59 544 aaKnown RBP10.28□□□□□ -0.76
SYNE2-209ENST00000553308 SAMM50Q9Y512 469 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 PCDHA10Q9Y5I2 948 aa10.28□□□□□ -0.76
SYNE2-209ENST00000553308 ZFHX2Q9C0A1 2572 aaPredicted RBP10.27□□□□□ -0.76
SYNE2-209ENST00000553308 WDR81Q562E7 1941 aa10.27□□□□□ -0.76
SYNE2-209ENST00000553308 EOMESO95936 686 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 OATP04181 439 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 TMOD1P28289 359 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 ALDH7A1P49419 539 aaKnown RBP10.27□□□□□ -0.77
SYNE2-209ENST00000553308 FOXK2Q01167 660 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 PRKCEQ02156 737 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 DRP2Q13474 957 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 UGCGQ16739 394 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 LONRF3Q496Y0 759 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 PRR16Q569H4 304 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 MCTP2Q6DN12 878 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 TMC5Q6UXY8 1006 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 FLCNQ8NFG4 579 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms