RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SRRM3A6NNA2 597 aaPredicted RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 PRDM1O75626 825 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 GGPS1O95749 300 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 IFIT2P09913 472 aaKnown RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 GBP2P32456 591 aaPredicted RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 CA8P35219 290 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 SLC16A2P36021 539 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 SCNN1AP37088 669 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 TDO2P48775 406 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 SARSP49591 514 aaKnown RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 LIMK1P53667 647 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 SEC13P55735 322 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 APOBRQ0VD83 1088 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 KCNH2Q12809 1159 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 NEDD9Q14511 834 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 LETM2Q2VYF4 491 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 HSDL1Q3SXM5 330 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 ZBTB41Q5SVQ8 909 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 RSPO2Q6UXX9 243 aaPredicted RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 RNF19BQ6ZMZ0 732 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 MAML2Q8IZL2 1156 aaPredicted RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 NME8Q8N427 588 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 C12orf76Q8N812 135 aaPredicted RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 PJA1Q8NG27 643 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 SYTL5Q8TDW5 730 aaPredicted RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 SPATA32Q96LK8 384 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 ZNF558Q96NG5 402 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 MYL10Q9BUA6 226 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 PRR14Q9BWN1 585 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 ATP6V0A4Q9HBG4 840 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 ARHGEF3Q9NR81 526 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 C1orf112Q9NSG2 853 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 PAG1Q9NWQ8 432 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 MAP3K20Q9NYL2 800 aaKnown RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 MAP10Q9P2G4 905 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 DYNC1LI1Q9Y6G9 523 aaKnown RBP6□□□□□ -1.45
CKAP4-203ENST00000553039 WDR19Q8NEZ3 1342 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 PTPRSQ13332 1948 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 DNAH14Q0VDD8 3507 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 RRN3P2A6NIE6 340 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 TSPY2A6NKD2 308 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 FAM170BA6NMN3 283 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 GSG1L2A8MUP6 293 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 C1QTNF9BB2RNN3 333 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 NARSO43776 548 aaKnown RBP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 LGALS2P05162 132 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 C1QTNF9P0C862 333 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 ARP10275 920 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 MYCLP12524 364 aaPredicted RBP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 JUNDP17535 347 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 CD52P31358 61 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 ALDH7A1P49419 539 aaKnown RBP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 ADAM17P78536 824 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 PRKCQQ04759 706 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 PAK2Q13177 524 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 MRPL58Q14197 206 aaKnown RBP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 TTBK2Q6IQ55 1244 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 KCNT2Q6UVM3 1135 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 TMC5Q6UXY8 1006 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 C15orf39Q6ZRI6 1047 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 PRR23CQ6ZRP0 262 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 SLC24A5Q71RS6 500 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 GLYCTKQ8IVS8 523 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 RGL4Q8IZJ4 473 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 SAMD3Q8N6K7 520 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 GPR152Q8TDT2 470 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 NELL1Q92832 810 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 BCAS3Q9H6U6 928 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 SFXN1Q9H9B4 322 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 PARD6AQ9NPB6 346 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 SLC2A4RGQ9NR83 387 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 STK39Q9UEW8 545 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 CDH22Q9UJ99 828 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 PADI3Q9ULW8 664 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 MRPS17Q9Y2R5 130 aaKnown RBP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 MRPL11Q9Y3B7 192 aaKnown RBP5.99□□□□□ -1.45
CKAP4-203ENST00000553039 CACNA1IQ9P0X4 2223 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 FOCADQ5VW36 1801 aa5.99□□□□□ -1.45
CKAP4-203ENST00000553039 DENND3A2RUS2 1198 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 POTEMA6NI47 508 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 TM4SF5O14894 197 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 KCNK5O95279 499 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 ZIC2O95409 532 aaPredicted RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 ABL1P00519 1130 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 EIF2AK2P19525 551 aaKnown RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 IBSPP21815 317 aaPredicted RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 CNR2P34972 360 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 MRPS6P82932 125 aaKnown RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 PFKPQ01813 784 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 NFX1Q12986 1120 aaKnown RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 SIM2Q14190 667 aaPredicted RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 GNPTABQ3T906 1256 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 AASDHQ4L235 1098 aaPredicted RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 SLC44A4Q53GD3 710 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 FAM102BQ5T8I3 360 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 BLOC1S3Q6QNY0 202 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 POTEGQ6S5H5 508 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 MAMSTRQ6ZN01 415 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 PRR23BQ6ZRT6 265 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms