RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PSPC1Q8WXF1 523 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 SCLT1Q96NL6 688 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 PPP1R16BQ96T49 567 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 OSMRQ99650 979 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 ADAMTS10Q9H324 1103 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 XPNPEP1Q9NQW7 623 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 DDX19AQ9NUU7 478 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 YEATS4O95619 227 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 BRD1O95696 1058 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 ATP2A2P16615 1042 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 CD52P31358 61 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 SLC39A14Q15043 492 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 ECM1Q16610 540 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 ATL3Q6DD88 541 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 MCPH1Q8NEM0 835 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 PHOSPHO2Q8TCD6 241 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 TMEM40Q8WWA1 233 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 NLRP7Q8WX94 980 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 FTHL17Q9BXU8 183 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 AGO3Q9H9G7 860 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 GINS2Q9Y248 185 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
TRAFD1-209ENST00000552896 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 EYA4O95677 639 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 DARSP14868 501 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 EIF4BP23588 611 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 CDC25AP30304 524 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 CEBPZQ03701 1054 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 MXD4Q14582 209 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 TMEM119Q4V9L6 283 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 FAM109BQ6ICB4 259 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 CABP7Q86V35 215 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 RHPN2Q8IUC4 686 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 LINC00301Q8NCQ3 95 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 CDK5RAP3Q96JB5 506 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 ERVK-5Q9HDB9 667 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 PADI3Q9ULW8 664 aa13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-209ENST00000552896 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 GPR182O15218 404 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 ASAP2O43150 1006 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 AMHP03971 560 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 SFPQP23246 707 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 UBA7P41226 1012 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 DEFB103AP81534 67 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 GRIN1Q05586 938 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 LAMTOR4Q0VGL1 99 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 GRB10Q13322 594 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 STK38Q15208 465 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 RAB30Q15771 203 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 PADI6Q6TGC4 694 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 FAM228AQ86W67 206 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 LINC01599Q8WXQ3 324 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 NLRP4Q96MN2 994 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 PNMA5Q96PV4 448 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 GCOM2Q9BZD3 368 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 BHMT2Q9H2M3 363 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 DNM3Q9UQ16 869 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 CDH23Q9H251 3354 aa13.02□□□□□ -0.33
TRAFD1-209ENST00000552896 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 A0A087WZ62 844 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 SPTLC2O15270 562 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 PPP6R2O75170 966 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 CYP11B2P19099 503 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 DNAJB2P25686 324 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 ARL2P36404 184 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 PHKA2P46019 1235 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 TFDP1Q14186 410 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 FDXACB1Q9BRP7 624 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 INO80BQ9C086 356 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
TRAFD1-209ENST00000552896 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms