RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 MTSS1LQ765P7 747 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 SAMD3Q8N6K7 520 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 ADAM32Q8TC27 787 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 RSPH1Q8WYR4 309 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 APPBP2Q92624 585 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 CASD1Q96PB1 797 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
PRKCH-203ENST00000552875 CNOT1A5YKK6 2376 aaKnown RBP10.09□□□□□ -0.79
PRKCH-203ENST00000552875 IGF2RP11717 2491 aa10.09□□□□□ -0.79
PRKCH-203ENST00000552875 FIBPO43427 364 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 SEC24BO95487 1268 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 CHGBP05060 677 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 HSD17B4P51659 736 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 CLCN4P51793 760 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 SP4Q02446 784 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 DAB2IPQ5VWQ8 1189 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 RNF43Q68DV7 783 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 LRRC55Q6ZSA7 311 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 STOX1Q6ZVD7 989 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 CEP68Q76N32 757 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 GET4Q7L5D6 327 aaPredicted RBP10.08□□□□□ -0.8
PRKCH-203ENST00000552875 DDX53Q86TM3 631 aaKnown RBP10.08□□□□□ -0.8
PRKCH-203ENST00000552875 AUTS2Q8WXX7 1259 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 SMG7Q92540 1137 aaKnown RBP10.08□□□□□ -0.8
PRKCH-203ENST00000552875 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 TMEM47Q9BQJ4 181 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 WASF3Q9UPY6 502 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 GPSM3Q9Y4H4 160 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 NEUROG3Q9Y4Z2 214 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 DENND4AQ7Z401 1863 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 NAV2Q8IVL1 2488 aa10.08□□□□□ -0.8
PRKCH-203ENST00000552875 KIAA1217Q5T5P2 1943 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 DHX16O60231 1041 aaKnown RBP10.07□□□□□ -0.8
PRKCH-203ENST00000552875 MGEA5O60502 916 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 ZFYP08048 801 aaPredicted RBP10.07□□□□□ -0.8
PRKCH-203ENST00000552875 TRIM27P14373 513 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 MARK3P27448 753 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 TCF7P36402 384 aaPredicted RBP10.07□□□□□ -0.8
PRKCH-203ENST00000552875 BCAR1P56945 870 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 FAM189BP81408 668 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 SF3A2Q15428 464 aaKnown RBP10.07□□□□□ -0.8
PRKCH-203ENST00000552875 MARCH8Q5T0T0 291 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 C19orf48Q6RUI8 117 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 TPRG1Q6ZUI0 275 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 PROSER1Q86XN7 944 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 LOXL4Q96JB6 756 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 SMARCAD1Q9H4L7 1026 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 MAN1C1Q9NR34 630 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 ST3GAL5Q9UNP4 418 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 BPTFQ12830 3046 aa10.07□□□□□ -0.8
PRKCH-203ENST00000552875 HELZ2Q9BYK8 2649 aaKnown RBP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 SMIM35A0A1B0GVV1 85 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 SPATA31C2B4DYI2 1134 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 INPPL1O15357 1258 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 ABCB7O75027 752 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 TDGF1P13385 188 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 CEACAM1P13688 526 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 CD72P21854 359 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 TARSP26639 723 aaKnown RBP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 CXCL12P48061 93 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 LONP2Q86WA8 852 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 FAM160A2Q8N612 972 aaPredicted RBP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 SENP7Q9BQF6 1050 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 C1orf115Q9H7X2 142 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 MRPL17Q9NRX2 175 aaKnown RBP10.06□□□□□ -0.8
PRKCH-203ENST00000552875 TOMM22Q9NS69 142 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 CACNA2D2Q9NY47 1150 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 MSRB2Q9Y3D2 182 aa10.06□□□□□ -0.8
PRKCH-203ENST00000552875 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 NT5C1B-RDH14C9J2C7 533 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 ADH1AP07327 375 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 INSRRP14616 1297 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 NCLP19338 710 aaKnown RBP10.05□□□□□ -0.8
PRKCH-203ENST00000552875 GHRHRQ02643 423 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 TRAF1Q13077 416 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 WTAPQ15007 396 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 COL28A1Q2UY09 1125 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 SH3PXD2AQ5TCZ1 1133 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 FEZF2Q8TBJ5 459 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 SEPT1Q8WYJ6 367 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 FRAT1Q92837 279 aaPredicted RBP10.05□□□□□ -0.8
PRKCH-203ENST00000552875 OSBP2Q969R2 916 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 TTC14Q96N46 770 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 INPP4AQ96PE3 977 aaPredicted RBP10.05□□□□□ -0.8
PRKCH-203ENST00000552875 MKNK1Q9BUB5 465 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 CHRDQ9H2X0 955 aa10.05□□□□□ -0.8
PRKCH-203ENST00000552875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRKCH-203ENST00000552875 NOC2LQ9Y3T9 749 aaKnown RBP10.05□□□□□ -0.8
PRKCH-203ENST00000552875 SMG1Q96Q15 3661 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms