RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 ZBTB42B2RXF5 422 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 NT5C1B-RDH14C9J2C7 533 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
PTCH1-222ENST00000551425 DCNP07585 359 aaKnown RBP13.62□□□□□ -0.23
PTCH1-222ENST00000551425 SRFP11831 508 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 ZNF484Q5JVG2 852 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 DDX53Q86TM3 631 aaKnown RBP13.62□□□□□ -0.23
PTCH1-222ENST00000551425 SLC44A3Q8N4M1 653 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
PTCH1-222ENST00000551425 PSTPIP2Q9H939 334 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 CA14Q9ULX7 337 aa13.62□□□□□ -0.23
PTCH1-222ENST00000551425 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
PTCH1-222ENST00000551425 PRR5-ARHGAP8B1AHC4 643 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 ZSCAN20P17040 1043 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 SMARCA1P28370 1054 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 ARHGAP8P85298 464 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 ZNF528Q3MIS6 628 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 VARS2Q5ST30 1063 aaKnown RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 CWC27Q6UX04 472 aaKnown RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 ZNF598Q86UK7 904 aaKnown RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-222ENST00000551425 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 RSPH1Q8WYR4 309 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 PPP1R16BQ96T49 567 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 MXRA8Q9BRK3 442 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 FANCMQ8IYD8 2048 aa13.61□□□□□ -0.23
PTCH1-222ENST00000551425 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 A0A0U1RQF3 1178 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
PTCH1-222ENST00000551425 SPTLC1O15269 473 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 C22orf31O95567 290 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 VTNP04004 478 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 CLCN4P51793 760 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 LMNB2Q03252 620 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 ITGB3BPQ13352 177 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-222ENST00000551425 RNF169Q8NCN4 708 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 CMASQ8NFW8 434 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-222ENST00000551425 IGSF21Q96ID5 467 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 MAP3K14Q99558 947 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 RHOBTB2Q9BYZ6 727 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 NCDNQ9UBB6 729 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 SEC63Q9UGP8 760 aaKnown RBP13.6□□□□□ -0.23
PTCH1-222ENST00000551425 PCDHA6Q9UN73 950 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 USP24Q9UPU5 2620 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 PCDHA8Q9Y5H6 950 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 CHD8Q9HCK8 2581 aa13.6□□□□□ -0.23
PTCH1-222ENST00000551425 MAP1BP46821 2468 aaKnown RBP13.59□□□□□ -0.23
PTCH1-222ENST00000551425 ERICH2A1L162 156 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 POTEMA6NI47 508 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 ADRB1P08588 477 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 GLULP15104 373 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 TRDNQ13061 729 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 WTAPQ15007 396 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 FAM160B1Q5W0V3 765 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 CYP26C1Q6V0L0 522 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 PJA1Q8NG27 643 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 GPR152Q8TDT2 470 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 RTKNQ9BST9 563 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 ADAMTS10Q9H324 1103 aa13.59□□□□□ -0.23
PTCH1-222ENST00000551425 WDR6Q9NNW5 1121 aaKnown RBP13.59□□□□□ -0.23
PTCH1-222ENST00000551425 CDV3Q9UKY7 258 aaKnown RBP13.59□□□□□ -0.23
PTCH1-222ENST00000551425 BAHCC1Q9P281 2608 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 BACH1O14867 736 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 ZC3H11AO75152 810 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTCH1-222ENST00000551425 CCNE2O96020 404 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 EIF4BP23588 611 aaKnown RBP13.58□□□□□ -0.24
PTCH1-222ENST00000551425 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-222ENST00000551425 UBE2SQ16763 222 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 PDXDC2PQ6P474 469 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-222ENST00000551425 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-222ENST00000551425 STAMQ92783 540 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 KLHL5Q96PQ7 755 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 LZTS2Q9BRK4 669 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 EMILIN2Q9BXX0 1053 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 AGO4Q9HCK5 861 aaKnown RBP13.58□□□□□ -0.24
PTCH1-222ENST00000551425 SLC2A4RGQ9NR83 387 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 STK39Q9UEW8 545 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 FBXO4Q9UKT5 387 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
PTCH1-222ENST00000551425 HIP1O00291 1037 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 GALTP07902 379 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 ATP4AP20648 1035 aa13.57□□□□□ -0.24
PTCH1-222ENST00000551425 KLRC2P26717 231 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms