RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 RDM1Q8NG50 284 aa23.32■■□□□ 1.32
CACNB3-218ENST00000550771 MRPS27Q92552 414 aaKnown RBP23.32■■□□□ 1.32
CACNB3-218ENST00000550771 CASD1Q96PB1 797 aa23.32■■□□□ 1.32
CACNB3-218ENST00000550771 TEKT3Q9BXF9 490 aa23.32■■□□□ 1.32
CACNB3-218ENST00000550771 RNF19AQ9NV58 838 aa23.32■■□□□ 1.32
CACNB3-218ENST00000550771 PUF60Q9UHX1 559 aaKnown RBP23.32■■□□□ 1.32
CACNB3-218ENST00000550771 MUC6Q6W4X9 2439 aa23.32■■□□□ 1.32
CACNB3-218ENST00000550771 GPC3P51654 580 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 NLRP5P59047 1200 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 CBX2Q14781 532 aaPredicted RBP23.31■■□□□ 1.32
CACNB3-218ENST00000550771 LRCH2Q5VUJ6 765 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 TMEM184AQ6ZMB5 413 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 LRRC55Q6ZSA7 311 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 HFE2Q6ZVN8 426 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 ECHDC2Q86YB7 292 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 ABI1Q8IZP0 508 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 LRRC43Q8N309 656 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 EDAQ92838 391 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 MFSD14AQ96MC6 490 aa23.31■■□□□ 1.32
CACNB3-218ENST00000550771 PHF7Q9BWX1 381 aaPredicted RBP23.31■■□□□ 1.32
CACNB3-218ENST00000550771 PLXNA4Q9HCM2 1894 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 DARSP14868 501 aaKnown RBP23.3■■□□□ 1.32
CACNB3-218ENST00000550771 ATF7P17544 494 aaPredicted RBP23.3■■□□□ 1.32
CACNB3-218ENST00000550771 PPM1AP35813 382 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 CCT2P78371 535 aaKnown RBP23.3■■□□□ 1.32
CACNB3-218ENST00000550771 TBC1D8BQ0IIM8 1120 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 Q4G0T1 1027 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 TRIM22Q8IYM9 498 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 VN1R2Q8NFZ6 395 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 SUSD6Q92537 303 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 UNC45AQ9H3U1 944 aa23.3■■□□□ 1.32
CACNB3-218ENST00000550771 NCOA5Q9HCD5 579 aaKnown RBP23.3■■□□□ 1.32
CACNB3-218ENST00000550771 NGRNQ9NPE2 291 aaKnown RBP23.3■■□□□ 1.32
CACNB3-218ENST00000550771 EPB41L2O43491 1005 aaKnown RBP23.29■■□□□ 1.32
CACNB3-218ENST00000550771 CHMP2AO43633 222 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 PSMD10O75832 226 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 SRGAP2BP0DMP2 458 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 CDC42EP1Q00587 391 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 KCNC3Q14003 757 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 TARBP2Q15633 366 aaKnown RBP23.29■■□□□ 1.32
CACNB3-218ENST00000550771 UGCGQ16739 394 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 KCNT2Q6UVM3 1135 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 TBCKQ8TEA7 893 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 ZNF558Q96NG5 402 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 TCF25Q9BQ70 676 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 PCDHA4Q9UN74 947 aa23.29■■□□□ 1.32
CACNB3-218ENST00000550771 CYP3A7-CYP3A51PA0A087WV96 503 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 A0A0U1RQF3 1178 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 EOMESO95936 686 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 CYP3A7P24462 503 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 RBM10P98175 930 aaKnown RBP23.28■■□□□ 1.32
CACNB3-218ENST00000550771 KRT17Q04695 432 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 PLPP4Q5VZY2 271 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 RUFY3Q7L099 469 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 BMP8AQ7Z5Y6 402 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 FAM177A1Q8N128 213 aaPredicted RBP23.28■■□□□ 1.32
CACNB3-218ENST00000550771 SCLT1Q96NL6 688 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 NIFKQ9BYG3 293 aaKnown RBP23.28■■□□□ 1.32
CACNB3-218ENST00000550771 DACT1Q9NYF0 836 aa23.28■■□□□ 1.32
CACNB3-218ENST00000550771 C5orf42Q9H799 3197 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 SSRP1Q08945 709 aaKnown RBP23.27■■□□□ 1.32
CACNB3-218ENST00000550771 XKR3Q5GH77 459 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 B3GNT9Q6UX72 402 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 ZNF598Q86UK7 904 aaKnown RBP23.27■■□□□ 1.32
CACNB3-218ENST00000550771 NLRP7Q8WX94 980 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 ZNF668Q96K58 619 aaPredicted RBP23.27■■□□□ 1.32
CACNB3-218ENST00000550771 FBXL18Q96ME1 805 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 ZSWIM6Q9HCJ5 1215 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 ENTPD7Q9NQZ7 604 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 SPG21Q9NZD8 308 aa23.27■■□□□ 1.32
CACNB3-218ENST00000550771 DEXIO95424 95 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 TOB2Q14106 344 aaPredicted RBP23.26■■□□□ 1.31
CACNB3-218ENST00000550771 CLLU1OSQ5K130 101 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 GALNT17Q6IS24 598 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 MOXD1Q6UVY6 613 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 MIER3Q7Z3K6 550 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 RSPH1Q8WYR4 309 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 GJA10Q969M2 543 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 GCOM2Q9BZD3 368 aaPredicted RBP23.26■■□□□ 1.31
CACNB3-218ENST00000550771 S1PR5Q9H228 398 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 CHST12Q9NRB3 414 aa23.26■■□□□ 1.31
CACNB3-218ENST00000550771 IGKV6-21A0A0C4DH24 114 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 M0R2N6 131 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 DRP2Q13474 957 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 ANKRD54Q6NXT1 300 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 TRIM67Q6ZTA4 783 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 BLIDQ8IZY5 108 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 DAGLBQ8NCG7 672 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 RNF169Q8NCN4 708 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 ZNF274Q96GC6 653 aaPredicted RBP23.25■■□□□ 1.31
CACNB3-218ENST00000550771 RPGRIP1Q96KN7 1286 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 MBOAT7Q96N66 472 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 CEP89Q96ST8 783 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 TRAIPQ9BWF2 469 aa23.25■■□□□ 1.31
CACNB3-218ENST00000550771 MRPL9Q9BYD2 267 aaKnown RBP23.25■■□□□ 1.31
CACNB3-218ENST00000550771 SEPT9Q9UHD8 586 aaPredicted RBP23.25■■□□□ 1.31
CACNB3-218ENST00000550771 TECTAO75443 2155 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 HIDE1A8MVS5 230 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 CPLX1O14810 134 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 STBD1O95210 358 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms