RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	CA3	P07451	260 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	ACTN1	P12814	892 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	PDC	P20941	246 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	RPA1	P27694	616 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	MARCKS	P29966	332 aa	Predicted RBP	12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	CCT6A	P40227	531 aa	Known RBP	12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	PRPH	P41219	470 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	GATM	P50440	423 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	CRYBB1	P53674	252 aa	Predicted RBP	12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	GRB10	Q13322	594 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	IKBKE	Q14164	716 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	DSC3	Q14574	896 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	GRIN2C	Q14957	1233 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	SPECC1	Q5M775	1068 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	IER5	Q5VY09	327 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	MAEA	Q7L5Y9	396 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	CRIPAK	Q8N1N5	446 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	NME8	Q8N427	588 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	DEFB123	Q8N688	67 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	SNX29	Q8TEQ0	813 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	PRPF31	Q8WWY3	499 aa	Known RBP	12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	BSND	Q8WZ55	320 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	SEPT8	Q92599	483 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	CLIC6	Q96NY7	704 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	SEMA6B	Q9H3T3	888 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	TUFT1	Q9NNX1	390 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	ANKEF1	Q9NU02	776 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	MTMR10	Q9NXD2	777 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	TFIP11	Q9UBB9	837 aa	Known RBP	12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	ST3GAL5	Q9UNP4	418 aa		12.52	□□□□□ -0.41
RAB5B-208	ENST00000550283	SPDYE4	A6NLX3	237 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	RFXAP	O00287	272 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	UPP2	O95045	317 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	DARS	P14868	501 aa	Known RBP	12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	POLG	P54098	1239 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	PDIA5	Q14554	519 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	DTHD1	Q6ZMT9	781 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	RHPN2	Q8IUC4	686 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	MYOCD	Q8IZQ8	938 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	NEK9	Q8TD19	979 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	TNPO1	Q92973	898 aa	Known RBP	12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	TIFA	Q96CG3	184 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	NLRP4	Q96MN2	994 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	SLC9A7	Q96T83	725 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	CERS4	Q9HA82	394 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	IFT122	Q9HBG6	1241 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	DDX19A	Q9NUU7	478 aa	Known RBP	12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	FBXO2	Q9UK22	296 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	KIAA1024	Q9UPX6	916 aa		12.51	□□□□□ -0.41
RAB5B-208	ENST00000550283	RPS6KA5	O75582	802 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	GJB5	O95377	273 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	EDN1	P05305	212 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	LINC00271	P0C7V0	271 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	ZSCAN22	P10073	491 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	IBSP	P21815	317 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	GLRA2	P23416	452 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	ARL2	P36404	184 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	KCNJ6	P48051	423 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	LAMTOR4	Q0VGL1	99 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	NFX1	Q12986	1120 aa	Known RBP	12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	PAK2	Q13177	524 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	CAPS	Q13938	189 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	MAP7D2	Q96T17	732 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	RUSC1	Q9BVN2	902 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	HCST	Q9UBK5	93 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	USP20	Q9Y2K6	914 aa		12.5	□□□□□ -0.41
RAB5B-208	ENST00000550283	TRANK1	O15050	2925 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283		A0A087X0B3	334 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	TTLL13P	A6NNM8	815 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283		M0QZ92	97 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	LAD1	O00515	517 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	F13A1	P00488	732 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	SRGAP2C	P0DJJ0	459 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	EIF4B	P23588	611 aa	Known RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	RFC5	P40937	340 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	HTRA4	P83105	476 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	TAP1	Q03518	808 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	ADGRE1	Q14246	886 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	ZRSR1	Q15695	479 aa	Known RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	TMEM119	Q4V9L6	283 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	OTUD6A	Q7L8S5	288 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	DAW1	Q8N136	415 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	PHOSPHO2	Q8TCD6	241 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	NLRP7	Q8WX94	980 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	TOP1MT	Q969P6	601 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	EPSTI1	Q96J88	318 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	IPO9	Q96P70	1041 aa	Known RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	ADAM2	Q99965	735 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	CSRNP2	Q9H175	543 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	POLR3F	Q9H1D9	316 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	BHMT2	Q9H2M3	363 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	RC3H2	Q9HBD1	1191 aa	Known RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	RNF19A	Q9NV58	838 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	DBR1	Q9UK59	544 aa	Known RBP	12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	PCDHA11	Q9Y5I1	949 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	COL4A3BP	Q9Y5P4	624 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	SQOR	Q9Y6N5	450 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	UNC80	Q8N2C7	3258 aa		12.49	□□□□□ -0.41
RAB5B-208	ENST00000550283	MYH15	Q9Y2K3	1946 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms