RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 FBXL6Q8N531 539 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 PHKBQ93100 1093 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
SMARCD1-208ENST00000550280 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 PSAPP07602 524 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 DARSP14868 501 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 METAP2P50579 478 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 SETQ01105 290 aaPredicted RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 PRKCEQ02156 737 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 ODR4Q5SWX8 454 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 Q6ZUG5 572 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 SLC39A11Q8N1S5 342 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 BRF1Q92994 677 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 SMOC2Q9H3U7 446 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 AKT3Q9Y243 479 aa13.1□□□□□ -0.31
SMARCD1-208ENST00000550280 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 NT5C1B-RDH14C9J2C7 533 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 MAGEB2O15479 319 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 B4GALT3O60512 393 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 OATP04181 439 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 HELQQ8TDG4 1101 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 BCL7CQ8WUZ0 217 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 ZNF558Q96NG5 402 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 AGXT2Q9BYV1 514 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 POMKQ9H5K3 350 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 ENTPD7Q9NQZ7 604 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 DISC1Q9NRI5 854 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 FAM86C1Q9NVL1 165 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
SMARCD1-208ENST00000550280 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 C2CD4DB7Z1M9 353 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 WEE2P0C1S8 567 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 AVPR2P30518 371 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 PTPN5P54829 565 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 TMC7Q7Z402 723 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 MRPL43Q8N983 215 aaKnown RBP13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 AUTS2Q8WXX7 1259 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 FAM167AQ96KS9 214 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 SH2D3AQ9BRG2 576 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 C6orf50Q9HD87 102 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 NGRNQ9NPE2 291 aaKnown RBP13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 VPS54Q9P1Q0 977 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 DMDP11532 3685 aa13.08□□□□□ -0.32
SMARCD1-208ENST00000550280 IGKV6-21A0A0C4DH24 114 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 CHMP2AO43633 222 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 PSMD10O75832 226 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 BRD1O95696 1058 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 KRT32Q14532 448 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 NPY5RQ15761 445 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 FBXL16Q8N461 479 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 C12orf76Q8N812 135 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 LPPQ93052 612 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 MAP7D2Q96T17 732 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 RIT2Q99578 217 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 VN1R3Q9BXE9 311 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 NCOA5Q9HCD5 579 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 CFAP54Q96N23 3096 aa13.07□□□□□ -0.32
SMARCD1-208ENST00000550280 WDR81Q562E7 1941 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 FSD2A1L4K1 749 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 M0R2N6 131 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 HOXA2O43364 376 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 CDC45O75419 566 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 TDP2O95551 362 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 ZSCAN20P17040 1043 aaPredicted RBP13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 IFNAR1P17181 557 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 HOXB8P17481 243 aaPredicted RBP13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 HSPA4P34932 840 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 PPM1AP35813 382 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 BCAR1P56945 870 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
SMARCD1-208ENST00000550280 KREMEN2Q8NCW0 462 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms