RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ZBTB39O15060 712 aa28.91■■■□□ 2.22
CPSF6-205ENST00000550075 EIF4BP23588 611 aaKnown RBP28.91■■■□□ 2.22
CPSF6-205ENST00000550075 PPP2R2DQ66LE6 453 aa28.91■■■□□ 2.22
CPSF6-205ENST00000550075 RAD9AQ99638 391 aa28.91■■■□□ 2.22
CPSF6-205ENST00000550075 ZNF576Q9H609 170 aa28.91■■■□□ 2.22
CPSF6-205ENST00000550075 BMP2KQ9NSY1 1161 aaPredicted RBP28.91■■■□□ 2.22
CPSF6-205ENST00000550075 COL4A3BPQ9Y5P4 624 aa28.91■■■□□ 2.22
CPSF6-205ENST00000550075 VWA3AA6NCI4 1184 aa28.9■■■□□ 2.22
CPSF6-205ENST00000550075 DARSP14868 501 aaKnown RBP28.9■■■□□ 2.22
CPSF6-205ENST00000550075 FAM228AQ86W67 206 aa28.9■■■□□ 2.22
CPSF6-205ENST00000550075 INO80BQ9C086 356 aaPredicted RBP28.9■■■□□ 2.22
CPSF6-205ENST00000550075 SEMA6BQ9H3T3 888 aa28.9■■■□□ 2.22
CPSF6-205ENST00000550075 RNF216Q9NWF9 866 aaPredicted RBP28.9■■■□□ 2.22
CPSF6-205ENST00000550075 ST3GAL5Q9UNP4 418 aa28.9■■■□□ 2.22
CPSF6-205ENST00000550075 SZT2Q5T011 3432 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 ARHGEF35A5YM69 484 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 ASAP2O43150 1006 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 SF3A1Q15459 793 aaKnown RBP28.89■■■□□ 2.22
CPSF6-205ENST00000550075 FAM117BQ6P1L5 589 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 TMEM143Q96AN5 459 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 ZNF668Q96K58 619 aaPredicted RBP28.89■■■□□ 2.22
CPSF6-205ENST00000550075 NLRP4Q96MN2 994 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 FAM161BQ96MY7 647 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 TSPYL2Q9H2G4 693 aaPredicted RBP28.89■■■□□ 2.22
CPSF6-205ENST00000550075 TTYH1Q9H313 450 aaPredicted RBP28.89■■■□□ 2.22
CPSF6-205ENST00000550075 MTMR10Q9NXD2 777 aa28.89■■■□□ 2.22
CPSF6-205ENST00000550075 DENND3A2RUS2 1198 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 ENPP3O14638 875 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 USO1O60763 962 aaKnown RBP28.88■■■□□ 2.21
CPSF6-205ENST00000550075 CA3P07451 260 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 SFPQP23246 707 aaKnown RBP eCLIP28.88■■■□□ 2.21
CPSF6-205ENST00000550075 MXD4Q14582 209 aaPredicted RBP28.88■■■□□ 2.21
CPSF6-205ENST00000550075 IL17AQ16552 155 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 TMCO2Q7Z6W1 182 aaPredicted RBP28.88■■■□□ 2.21
CPSF6-205ENST00000550075 MCPH1Q8NEM0 835 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 TOP1MTQ969P6 601 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 AK8Q96MA6 479 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 INSL6Q9Y581 213 aa28.88■■■□□ 2.21
CPSF6-205ENST00000550075 A0A087WZ62 844 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 SLC34A2O95436 690 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 MYOGP15173 224 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 PRPF31Q8WWY3 499 aaKnown RBP28.87■■■□□ 2.21
CPSF6-205ENST00000550075 YME1L1Q96TA2 773 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 FDXACB1Q9BRP7 624 aaPredicted RBP28.87■■■□□ 2.21
CPSF6-205ENST00000550075 XPNPEP1Q9NQW7 623 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 C1orf112Q9NSG2 853 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 DDX19AQ9NUU7 478 aaKnown RBP28.87■■■□□ 2.21
CPSF6-205ENST00000550075 KIAA1024Q9UPX6 916 aa28.87■■■□□ 2.21
CPSF6-205ENST00000550075 TTC3P53804 2025 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 UPP2O95045 317 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 LAMTOR4Q0VGL1 99 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 TFDP1Q14186 410 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 BECN1Q14457 450 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 KCTD17Q8N5Z5 321 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 LINC01599Q8WXQ3 324 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 CDK5RAP3Q96JB5 506 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 TMX1Q9H3N1 280 aa28.86■■■□□ 2.21
CPSF6-205ENST00000550075 MYH15Q9Y2K3 1946 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 PP2D1A8MPX8 630 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 SLC26A4O43511 780 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 STAG3L1P0CL83 205 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 HTRA4P83105 476 aaPredicted RBP28.85■■■□□ 2.21
CPSF6-205ENST00000550075 NPAS4Q8IUM7 802 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 SPRYD3Q8NCJ5 442 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 NT5C3AQ9H0P0 336 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 DNM3Q9UQ16 869 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 COL4A6Q14031 1691 aa28.85■■■□□ 2.21
CPSF6-205ENST00000550075 RBAK-RBAKDNI3L0D1 243 aa28.84■■■□□ 2.21
CPSF6-205ENST00000550075 ZSCAN20P17040 1043 aaPredicted RBP28.84■■■□□ 2.21
CPSF6-205ENST00000550075 LONP1P36776 959 aaKnown RBP28.84■■■□□ 2.21
CPSF6-205ENST00000550075 PHKA2P46019 1235 aa28.84■■■□□ 2.21
CPSF6-205ENST00000550075 KSR1Q8IVT5 923 aa28.84■■■□□ 2.21
CPSF6-205ENST00000550075 ADAM2Q99965 735 aa28.84■■■□□ 2.21
CPSF6-205ENST00000550075 A0A087WWV3 80 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 PADI6Q6TGC4 694 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 SRGAP1Q7Z6B7 1085 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 POLR3FQ9H1D9 316 aaPredicted RBP28.83■■■□□ 2.21
CPSF6-205ENST00000550075 BHMT2Q9H2M3 363 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 RGS18Q9NS28 235 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 LRFN2Q9ULH4 789 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 CLIC4Q9Y696 253 aa28.83■■■□□ 2.21
CPSF6-205ENST00000550075 SRGAP2CP0DJJ0 459 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 ZSCAN22P10073 491 aaPredicted RBP28.82■■■□□ 2.2
CPSF6-205ENST00000550075 CDC25AP30304 524 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 UBA7P41226 1012 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 SARSP49591 514 aaKnown RBP28.82■■■□□ 2.2
CPSF6-205ENST00000550075 ZRSR1Q15695 479 aaKnown RBP28.82■■■□□ 2.2
CPSF6-205ENST00000550075 ECM1Q16610 540 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 FAM173BQ6P4H8 233 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 SLC24A5Q71RS6 500 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 RTN4RL1Q86UN2 441 aaPredicted RBP28.82■■■□□ 2.2
CPSF6-205ENST00000550075 RNF149Q8NC42 400 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 ZNF396Q96N95 335 aaPredicted RBP28.82■■■□□ 2.2
CPSF6-205ENST00000550075 GUCD1Q96NT3 240 aa28.82■■■□□ 2.2
CPSF6-205ENST00000550075 MGEA5O60502 916 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 EYA4O95677 639 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 TAP1Q03518 808 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 HYIQ5T013 277 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 CATSPER4Q7RTX7 472 aa28.81■■■□□ 2.2
CPSF6-205ENST00000550075 CABP7Q86V35 215 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms