RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SMAP1Q8IYB5 467 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 OSMRQ99650 979 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 ADAMTS10Q9H324 1103 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 RNF19AQ9NV58 838 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 SPG21Q9NZD8 308 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 BRPF3Q9ULD4 1205 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 CEP131Q9UPN4 1083 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 NR2E1Q9Y466 385 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 PCDHA10Q9Y5I2 948 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 ZDBF2Q9HCK1 2354 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 HIDE1A8MVS5 230 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 PROB1E7EW31 1015 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ZBTB43O43298 467 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 VTNP04004 478 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 PSAPP07602 524 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ZSCAN20P17040 1043 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 EIF4BP23588 611 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 RCAN1P53805 252 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 VCPP55072 806 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 NLRP11P59045 1033 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ITIH3Q06033 890 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 APOBRQ0VD83 1088 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 RTN1Q16799 776 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 PLPP4Q5VZY2 271 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 EFCAB12Q6NXP0 572 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 DHX32Q7L7V1 743 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 UBALD2Q8IYN6 164 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 METTL13Q8N6R0 699 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 LINC01465Q8N7H1 131 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 SNX27Q96L92 541 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ZNF558Q96NG5 402 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 NECTIN4Q96NY8 510 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ZNF577Q9BSK1 485 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ZMYND12Q9H0C1 365 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
TRAFD1-207ENST00000550051 A0A0U1RQF3 1178 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 TMOD1P28289 359 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 CIITAP33076 1130 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 JAKMIP3Q5VZ66 844 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 CES5AQ6NT32 575 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 TMC7Q7Z402 723 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 ZNF598Q86UK7 904 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 ABI1Q8IZP0 508 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 CASP10Q92851 521 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 NRBP2Q9NSY0 501 aa11.16□□□□□ -0.62
TRAFD1-207ENST00000550051 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 GFRA3O60609 400 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 DARSP14868 501 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 CDC27P30260 824 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 CDC42EP1Q00587 391 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 SETQ01105 290 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 SMC1AQ14683 1233 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 BMS1Q14692 1282 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 LLGL2Q6P1M3 1020 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 SLC39A11Q8N1S5 342 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 KREMEN2Q8NCW0 462 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 ATOH1Q92858 354 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 TRAIPQ9BWF2 469 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 GABBR1Q9UBS5 961 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 HCFC2Q9Y5Z7 792 aa11.15□□□□□ -0.62
TRAFD1-207ENST00000550051 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 CARNS1A5YM72 827 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 ZNF862O60290 1169 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 CXCL14O95715 111 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 ADD1P35611 737 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 MTHFRP42898 656 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 GPC3P51654 580 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 CLCN3P51790 818 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 BCAR1P56945 870 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 CLLU1OSQ5K130 101 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 ZDHHC14Q8IZN3 488 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 MAP7D2Q96T17 732 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 APOL5Q9BWW9 433 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 POMKQ9H5K3 350 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 ANO2Q9NQ90 1003 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 CHST12Q9NRB3 414 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 DACT1Q9NYF0 836 aa11.14□□□□□ -0.63
TRAFD1-207ENST00000550051 AKT3Q9Y243 479 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms