RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ATP6V0A1Q93050 837 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 EXOC4Q96A65 974 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 BORCS6Q96GS4 357 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 FAM81BQ96LP2 452 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 SENP7Q9BQF6 1050 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 RAVER2Q9HCJ3 691 aaKnown RBP9.75□□□□□ -0.85
TMEM116-209ENST00000550020 PRDM10Q9NQV6 1147 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 PSD3Q9NYI0 1048 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 KIF13BQ9NQT8 1826 aa9.75□□□□□ -0.85
TMEM116-209ENST00000550020 SFI1A8K8P3 1242 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 NKRFO15226 690 aaKnown RBP eCLIP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 PMM2O15305 246 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 OPA1O60313 960 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 PALMO75781 387 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 PPP1R37O75864 691 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 SASH3O75995 380 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 VCAM1P19320 739 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 YWHABP31946 246 aaKnown RBP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 NOP2P46087 812 aaKnown RBP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 AARSP49588 968 aaKnown RBP eCLIP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 RARRES1P49788 294 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 CYP2J2P51589 502 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 EPHB4P54760 987 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 APBA1Q02410 837 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 BFSP1Q12934 665 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 PGM5Q15124 567 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 PPP2R5EQ16537 467 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 EMBQ6PCB8 327 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 NSUN6Q8TEA1 469 aaKnown RBP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 KIFAP3Q92845 792 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 C12orf42Q96LP6 360 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 TEPSINQ96N21 525 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 RMDN3Q96TC7 470 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 STRA6Q9BX79 667 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 TLR10Q9BXR5 811 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 INTS2Q9H0H0 1204 aaKnown RBP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 RPAP3Q9H6T3 665 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-209ENST00000550020 TMOD4Q9NZQ9 345 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 APEX2Q9UBZ4 518 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 DNAJC12Q9UKB3 198 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 TFR2Q9UP52 801 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 ZHX2Q9Y6X8 837 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 MYPNQ86TC9 1320 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 ZMYM2Q9UBW7 1377 aa9.74□□□□□ -0.85
TMEM116-209ENST00000550020 A6NNZ2 444 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 F8VZ95 297 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 DDX39AO00148 427 aaKnown RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 VWA5AO00534 786 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 NFIBO00712 420 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 POLR3GO15318 223 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 DHX15O43143 795 aaKnown RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 BUB1O43683 1085 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 PSAPP07602 524 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 TMEM253P0C7T8 217 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 TNFAIP3P21580 790 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 KLRC1P26715 233 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 CASP4P49662 377 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 VAMP7P51809 220 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 BACE1P56817 501 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 RPS6P62753 249 aaKnown RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 GTF2BQ00403 316 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 MAPK7Q13164 816 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 PAK2Q13177 524 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 MTMR2Q13614 643 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 TUBB8Q3ZCM7 444 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ZC2HC1CQ53FD0 456 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 NFRKBQ6P4R8 1299 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ZNF571Q7Z3V5 609 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ANKRD13CQ8N6S4 541 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 XXYLT1Q8NBI6 393 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ZNF280CQ8ND82 737 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 MCPH1Q8NEM0 835 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 COG1Q8WTW3 980 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 CTNNBL1Q8WYA6 563 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 FIZ1Q96SL8 496 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 NAP1L3Q99457 506 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 PDCD2LQ9BRP1 358 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 GLIS2Q9BZE0 524 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 MTFR1LQ9H019 292 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 SIX2Q9NPC8 291 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 PXMP2Q9NR77 195 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 RNF146Q9NTX7 359 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 STIM2Q9P246 746 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 SUCLA2Q9P2R7 463 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ZNF112Q9UJU3 913 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 PCDHA10Q9Y5I2 948 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 CD2APQ9Y5K6 639 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 LOXHD1Q8IVV2 1947 aa9.73□□□□□ -0.85
TMEM116-209ENST00000550020 ATAD5Q96QE3 1844 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 CCDC188H7C350 402 aa9.72□□□□□ -0.85
TMEM116-209ENST00000550020 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms