RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 ANO9A1A5B4 782 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 PDXKO00764 312 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 STAM2O75886 525 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 GMPSP49915 693 aaPredicted RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 PSMC5P62195 406 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 MXRA7P84157 204 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 CDKAL1Q5VV42 579 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 GLIS3Q8NEA6 775 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 A0A0U1RQJ8 604 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 ARP10275 920 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 LIG3P49916 1009 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 JAK3P52333 1124 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 RPS6P62753 249 aaKnown RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 DMTNQ08495 405 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 BFSP1Q12934 665 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.19■□□□□ 0.18
CUX1-214ENST00000550008 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 GPRC5CQ9NQ84 441 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 KCNH7Q9NS40 1196 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 TBK1Q9UHD2 729 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 FEZ2Q9UHY8 353 aaPredicted RBP16.19■□□□□ 0.18
CUX1-214ENST00000550008 MRC1P22897 1456 aa16.19■□□□□ 0.18
CUX1-214ENST00000550008 ATP8B1O43520 1251 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 NNTQ13423 1086 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 PCDHA10Q9Y5I2 948 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 SLIT3O75094 1523 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 POC1B-GALNT4F8VUJ3 575 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 ATF2P15336 505 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 GGCXP38435 758 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 BPIFB4P59827 614 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 B4GALNT4Q76KP1 1039 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 KIAA0895Q8NCT3 520 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 COMMD10Q9Y6G5 202 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 GOLGA8KD6RF30 607 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 CLDN3O15551 220 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 ACOT2P49753 483 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 TTC31Q49AM3 519 aaPredicted RBP16.18■□□□□ 0.18
CUX1-214ENST00000550008 TAAR1Q96RJ0 339 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 ATP6V0A4Q9HBG4 840 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 SNX12Q9UMY4 172 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 FAM169AQ9Y6X4 670 aa16.18■□□□□ 0.18
CUX1-214ENST00000550008 CYP26A1O43174 497 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 NR3C2P08235 984 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 KLRC1P26715 233 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 PBKQ96KB5 322 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 FZD1Q9UP38 647 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 PASKQ96RG2 1323 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 CTIFO43310 598 aaKnown RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 RNF8O76064 485 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 MCPH1Q8NEM0 835 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 ANKRD7Q92527 254 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 FAM149B1Q96BN6 582 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 POLR3FQ9H1D9 316 aaPredicted RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 SLC30A5Q8TAD4 765 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 COG1Q8WTW3 980 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 CALN1Q9BXU9 219 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 ZBTB39O15060 712 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 EVI5O60447 810 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 IREB2P48200 963 aaKnown RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 MDM2Q00987 491 aaPredicted RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 DR1Q01658 176 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 IL17AQ16552 155 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 EPC2Q52LR7 807 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 STYK1Q6J9G0 422 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 FRMD5Q7Z6J6 570 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 INTS13Q9NVM9 706 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 AMACRQ9UHK6 382 aa16.17■□□□□ 0.18
CUX1-214ENST00000550008 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
CUX1-214ENST00000550008 NFIBO00712 420 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 PDCLQ13371 301 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 KRT81Q14533 505 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 SLC18A3Q16572 532 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 ELOA2Q8IYF1 753 aaPredicted RBP16.16■□□□□ 0.18
CUX1-214ENST00000550008 ACAD9Q9H845 621 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 SEL1LQ9UBV2 794 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 DNAJC24Q6P3W2 148 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 PNMA5Q96PV4 448 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 FMO2Q99518 471 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 RNF14Q9UBS8 474 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 HESX1Q9UBX0 185 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 A0A087X0T9 212 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 ACSL3O95573 720 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 FAM228BP0C875 321 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 P4HA1P13674 534 aa16.16■□□□□ 0.18
CUX1-214ENST00000550008 STX2P32856 288 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms