RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 BDP1A6H8Y1 2624 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 C5orf67F2Z3F1 127 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 H3BNC9 293 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 EDIL3O43854 480 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 DGKIO75912 1065 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 CTNNB1P35222 781 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 PSMC5P62195 406 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 GPM6BQ13491 265 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC38-207ENST00000549752 ME3Q16798 604 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 NAALADL2Q58DX5 795 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 CMTR2Q8IYT2 770 aaKnown RBP11.72□□□□□ -0.53
CCDC38-207ENST00000549752 DDX12PQ92771 950 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
CCDC38-207ENST00000549752 ZSCAN31Q96LW9 406 aaPredicted RBP11.72□□□□□ -0.53
CCDC38-207ENST00000549752 SCLT1Q96NL6 688 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 NIFKQ9BYG3 293 aaKnown RBP11.72□□□□□ -0.53
CCDC38-207ENST00000549752 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
CCDC38-207ENST00000549752 LIMCH1Q9UPQ0 1083 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 PCDHB7Q9Y5E2 793 aa11.72□□□□□ -0.53
CCDC38-207ENST00000549752 ZNF862O60290 1169 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 VTNP04004 478 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 BMPR1AP36894 532 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 SARSP49591 514 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 CLCN3P51790 818 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 ZNF689Q96CS4 500 aaPredicted RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 OSMRQ99650 979 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 LLPHQ9BRT6 129 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 RGS18Q9NS28 235 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 ST3GAL5Q9UNP4 418 aa11.71□□□□□ -0.53
CCDC38-207ENST00000549752 NOC2LQ9Y3T9 749 aaKnown RBP11.71□□□□□ -0.53
CCDC38-207ENST00000549752 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 HOXA2O43364 376 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 NCK2O43639 380 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 SLC37A4O43826 429 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 GPR32O75388 356 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 MMP1P03956 469 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 P4HBP07237 508 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 HMGN5P82970 282 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 TARBP2Q15633 366 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 UGCGQ16739 394 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 TMEM266Q2M3C6 531 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 MTERF2Q49AM1 385 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 KRT40Q6A162 431 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 OTUD6AQ7L8S5 288 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 SPRED2Q7Z698 418 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 LINC01599Q8WXQ3 324 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 P2RX5Q93086 422 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 ADAM2Q99965 735 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 ELAC1Q9H777 363 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 UPF2Q9HAU5 1272 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 RC3H2Q9HBD1 1191 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
CCDC38-207ENST00000549752 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
CCDC38-207ENST00000549752 MYH11P35749 1972 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
CCDC38-207ENST00000549752 FDPSP14324 419 aaKnown RBP11.69□□□□□ -0.54
CCDC38-207ENST00000549752 EPHA7Q15375 998 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 RTN4RL1Q86UN2 441 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-207ENST00000549752 ZNF410Q86VK4 478 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 DIS3L2Q8IYB7 885 aaKnown RBP11.69□□□□□ -0.54
CCDC38-207ENST00000549752 LRRC71Q8N4P6 559 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 LINC01465Q8N7H1 131 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 NEK9Q8TD19 979 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 SLC7A3Q8WY07 619 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 RSPH1Q8WYR4 309 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 GJA10Q969M2 543 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 TMX1Q9H3N1 280 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 NSUN3Q9H649 340 aaKnown RBP11.69□□□□□ -0.54
CCDC38-207ENST00000549752 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 ATP6V0A4Q9HBG4 840 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 TMEM161AQ9NX61 479 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 VAV3Q9UKW4 847 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 PCDHA12Q9UN75 941 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms