RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 KRT18P05783 430 aaKnown RBP23.51■■□□□ 1.35
VPS29-206ENST00000549578 CTSHP09668 335 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 IER5Q5VY09 327 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 DYMQ7RTS9 669 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 TCP11Q8WWU5 503 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 PSPC1Q8WXF1 523 aaKnown RBP23.51■■□□□ 1.35
VPS29-206ENST00000549578 DDX12PQ92771 950 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 PAGE5Q96GU1 130 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 ZNF668Q96K58 619 aaPredicted RBP23.51■■□□□ 1.35
VPS29-206ENST00000549578 REEP2Q9BRK0 252 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 NOC4LQ9BVI4 516 aaKnown RBP23.51■■□□□ 1.35
VPS29-206ENST00000549578 PCDH10Q9P2E7 1040 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 UMODL1Q5DID0 1318 aa23.51■■□□□ 1.35
VPS29-206ENST00000549578 RSPH10B2B2RC85 870 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 RSPH10BP0C881 870 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 CKBP12277 381 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 CASP1P29466 404 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 ARL2P36404 184 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 RSPH3Q86UC2 560 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 RHPN2Q8IUC4 686 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 KSR1Q8IVT5 923 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 DAW1Q8N136 415 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 PRPF31Q8WWY3 499 aaKnown RBP23.5■■□□□ 1.35
VPS29-206ENST00000549578 DPF3Q92784 378 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 PPP1R12CQ9BZL4 782 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 HIPK3Q9H422 1215 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 DACT1Q9NYF0 836 aa23.5■■□□□ 1.35
VPS29-206ENST00000549578 TRIM43BA6NCK2 446 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 RBAK-RBAKDNI3L0D1 243 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 EVI5O60447 810 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 MAPK7Q13164 816 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 GIT2Q14161 759 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 RPAINQ86UA6 219 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 CAGE1Q8TC20 777 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 ASAP3Q8TDY4 903 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 TRIM43Q96BQ3 446 aaPredicted RBP23.49■■□□□ 1.35
VPS29-206ENST00000549578 SFI1A8K8P3 1242 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 KINO60870 393 aaKnown RBP23.49■■□□□ 1.35
VPS29-206ENST00000549578 MRPS6P82932 125 aaKnown RBP23.49■■□□□ 1.35
VPS29-206ENST00000549578 AMPD3Q01432 767 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 RBL2Q08999 1139 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 BFSP2Q13515 415 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 ZNF618Q5T7W0 954 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 NME8Q8N427 588 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 CCDC155Q8N6L0 562 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 BSNDQ8WZ55 320 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 DNAJC19Q96DA6 116 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 TIPINQ9BVW5 301 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 TRIM9Q9C026 710 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 BLZF1Q9H2G9 400 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 GINS2Q9Y248 185 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 COL4A3BPQ9Y5P4 624 aa23.49■■□□□ 1.35
VPS29-206ENST00000549578 GLRA2P23416 452 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 CYP2C18P33260 490 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 NLRP11P59045 1033 aaKnown RBP23.48■■□□□ 1.35
VPS29-206ENST00000549578 LAMTOR4Q0VGL1 99 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 KIZQ2M2Z5 673 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 GPT2Q8TD30 523 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 KIFAP3Q92845 792 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 DRC1Q96MC2 740 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 NLRP4Q96MN2 994 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 LRRC27Q9C0I9 530 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 CDY2AQ9Y6F7 541 aa23.48■■□□□ 1.35
VPS29-206ENST00000549578 PITPNM1O00562 1244 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 KIAA0355O15063 1070 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 CAND2O75155 1236 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 CHRNA1P02708 482 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 RPLP2P05387 115 aaKnown RBP23.47■■□□□ 1.35
VPS29-206ENST00000549578 GPC3P51654 580 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 CUL4BQ13620 913 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 TRAF7Q6Q0C0 670 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 TIGD1Q96MW7 591 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 C7orf25Q9BPX7 421 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 ZHX3Q9H4I2 956 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 CDHR5Q9HBB8 845 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 ODF2LQ9ULJ1 636 aa23.47■■□□□ 1.35
VPS29-206ENST00000549578 TBCAO75347 108 aaKnown RBP23.46■■□□□ 1.35
VPS29-206ENST00000549578 GPR32O75388 356 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 PRR29P0C7W0 189 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 SRGAP2CP0DJJ0 459 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 SELPP16109 830 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 ITGB8P26012 769 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 CCL23P55773 120 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 ASIC1P78348 528 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 MGAT3Q09327 533 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 CAPSQ13938 189 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 MXD4Q14582 209 aaPredicted RBP23.46■■□□□ 1.35
VPS29-206ENST00000549578 LRRC8DQ7L1W4 858 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 NLRP7Q8WX94 980 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 SCLT1Q96NL6 688 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 WNT8AQ9H1J5 351 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 ADAMTS10Q9H324 1103 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 TRPV2Q9Y5S1 764 aa23.46■■□□□ 1.35
VPS29-206ENST00000549578 M0QZ92 97 aa23.45■■□□□ 1.34
VPS29-206ENST00000549578 FAM13AO94988 1023 aa23.45■■□□□ 1.34
VPS29-206ENST00000549578 SIP14410 1827 aa23.45■■□□□ 1.34
VPS29-206ENST00000549578 IDEP14735 1019 aa23.45■■□□□ 1.34
VPS29-206ENST00000549578 MYH11P35749 1972 aa23.45■■□□□ 1.34
VPS29-206ENST00000549578 RNF149Q8NC42 400 aa23.45■■□□□ 1.34
VPS29-206ENST00000549578 OSMRQ99650 979 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms