RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ZNF215Q9UL58 517 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 MSCO60682 206 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 KRT18P05783 430 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 ATN1P54259 1190 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 GNG11P61952 73 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 EPHA7Q15375 998 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 ARSHQ5FYA8 562 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 EEPD1Q7L9B9 569 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 DNERQ8NFT8 737 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 MRPL44Q9H9J2 332 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 TBC1D22BQ9NU19 505 aa18.23■□□□□ 0.51
CHMP1A-204ENST00000547687 SYNGAP1Q96PV0 1343 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 COL6A1P12109 1028 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 NCBP1Q09161 790 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 HERC4Q5GLZ8 1057 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 FKBP15Q5T1M5 1219 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 NLRX1Q86UT6 975 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 SYT2Q8N9I0 419 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 RETREG2Q8NC44 543 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 ANKRD7Q92527 254 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 WRAP73Q9P2S5 460 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 PCDHA2Q9Y5H9 948 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 CASQ1P31415 396 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 ACVR2BQ13705 512 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 TSR1Q2NL82 804 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 VWA3BQ502W6 1294 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 PIGOQ8TEQ8 1089 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 IWS1Q96ST2 819 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 XPNPEP3Q9NQH7 507 aa18.22■□□□□ 0.51
CHMP1A-204ENST00000547687 ZBTB39O15060 712 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 RARBP10826 455 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 ALDH5A1P51649 535 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 RAD51AP2Q09MP3 1159 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 ZNF467Q7Z7K2 595 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 BANK1Q8NDB2 785 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 PCMTD1Q96MG8 357 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 ERGIC2Q96RQ1 377 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 DNAJC7Q99615 494 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 PDCL3Q9H2J4 239 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 SAMM50Q9Y512 469 aa18.21■□□□□ 0.51
CHMP1A-204ENST00000547687 FRMD3A2A2Y4 597 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 FANCGO15287 622 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 MAFGO15525 162 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 EYA4O95677 639 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 AKR1A1P14550 325 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 SYN1P17600 705 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 TRIM21P19474 475 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 NAA30Q147X3 362 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 LRRC55Q6ZSA7 311 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 KCTD17Q8N5Z5 321 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 DOCK5Q9H7D0 1870 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 DNM1LO00429 736 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 STAM2O75886 525 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 URI1O94763 535 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 KIF20AO95235 890 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 MUTP22033 750 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 KLK7P49862 253 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 FKBP3Q00688 224 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 GIT2Q14161 759 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 STXBP2Q15833 593 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 MAN2A1Q16706 1144 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 TMEM63BQ5T3F8 832 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 FBXO16Q8IX29 292 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 WDR24Q96S15 920 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 CHP1Q99653 195 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 LXNQ9BS40 222 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 FGFBP2Q9BYJ0 223 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 KATNBL1Q9H079 304 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 ZHX3Q9H4I2 956 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 PDGFCQ9NRA1 345 aa18.2■□□□□ 0.5
CHMP1A-204ENST00000547687 MYADML2A6NDP7 307 aa18.19■□□□□ 0.5
CHMP1A-204ENST00000547687 CAPN2P17655 700 aa18.19■□□□□ 0.5
CHMP1A-204ENST00000547687 ADCYAP1R1P41586 468 aa18.19■□□□□ 0.5
CHMP1A-204ENST00000547687 ACRBPQ8NEB7 543 aa18.19■□□□□ 0.5
CHMP1A-204ENST00000547687 ABHD16BQ9H3Z7 469 aa18.19■□□□□ 0.5
CHMP1A-204ENST00000547687 BCAS3Q9H6U6 928 aa18.19■□□□□ 0.5
CHMP1A-204ENST00000547687 KBTBD13C9JR72 458 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 EIF3JO75822 258 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 CCNE2O96020 404 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 P4HBP07237 508 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 KCNA2P16389 499 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 GNPTABQ3T906 1256 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 NEK9Q8TD19 979 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms