RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 VAV3Q9UKW4 847 aa25.54■■□□□ 1.68
CHD4-214ENST00000545942 IGKV6-21A0A0C4DH24 114 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 DDX11L8A8MPP1 907 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 EML1O00423 815 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 TBX3O15119 743 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 CSPG5O95196 566 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 LARGE1O95461 756 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 FDPSP14324 419 aaKnown RBP25.53■■□□□ 1.68
CHD4-214ENST00000545942 DNM2P50570 870 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 HYAL1Q12794 435 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 SPOUT1Q5T280 376 aaKnown RBP25.53■■□□□ 1.68
CHD4-214ENST00000545942 BRMS1Q9HCU9 246 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 AAASQ9NRG9 546 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 PCDHB12Q9Y5F1 795 aa25.53■■□□□ 1.68
CHD4-214ENST00000545942 GRXCR2A6NFK2 248 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 FGFR1P11362 822 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 DNAJB1P25685 340 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 KRT2P35908 639 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 NEK4P51957 841 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 DRP2Q13474 957 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 CTC1Q2NKJ3 1217 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 PPP2R3CQ969Q6 453 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 SH2D3AQ9BRG2 576 aa25.52■■□□□ 1.68
CHD4-214ENST00000545942 HOXA2O43364 376 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 MARCH6O60337 910 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 DKC1O60832 514 aaKnown RBP eCLIP25.51■■□□□ 1.67
CHD4-214ENST00000545942 IL9P15248 144 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 QARSP47897 775 aaKnown RBP25.51■■□□□ 1.67
CHD4-214ENST00000545942 EARS2Q5JPH6 523 aaKnown RBP25.51■■□□□ 1.67
CHD4-214ENST00000545942 ANO5Q75V66 913 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 FAM178BQ8IXR5 827 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 POF1BQ8WVV4 589 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 HAS1Q92839 578 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 TYW1Q9NV66 732 aaKnown RBP25.51■■□□□ 1.67
CHD4-214ENST00000545942 WDR81Q562E7 1941 aa25.51■■□□□ 1.67
CHD4-214ENST00000545942 MAFO75444 373 aaPredicted RBP25.5■■□□□ 1.67
CHD4-214ENST00000545942 P4HBP07237 508 aaKnown RBP25.5■■□□□ 1.67
CHD4-214ENST00000545942 NR5A1Q13285 461 aa25.5■■□□□ 1.67
CHD4-214ENST00000545942 POTEDQ86YR6 584 aa25.5■■□□□ 1.67
CHD4-214ENST00000545942 NSUN7Q8NE18 718 aaKnown RBP25.5■■□□□ 1.67
CHD4-214ENST00000545942 JPH2Q9BR39 696 aaPredicted RBP25.5■■□□□ 1.67
CHD4-214ENST00000545942 C1QTNF1Q9BXJ1 281 aa25.5■■□□□ 1.67
CHD4-214ENST00000545942 GCOM2Q9BZD3 368 aaPredicted RBP25.5■■□□□ 1.67
CHD4-214ENST00000545942 TMEM117Q9H0C3 514 aa25.5■■□□□ 1.67
CHD4-214ENST00000545942 FAM50BQ9Y247 325 aa25.5■■□□□ 1.67
CHD4-214ENST00000545942 BDP1A6H8Y1 2624 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 FGFR4P22455 802 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 LTBRP36941 435 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 UBE3AQ05086 875 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 ECHDC2Q86YB7 292 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 SLFN12Q8IYM2 578 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 TNFRSF25Q93038 417 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 IGFLR1Q9H665 355 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 CYP26B1Q9NR63 512 aa25.49■■□□□ 1.67
CHD4-214ENST00000545942 SUCLA2Q9P2R7 463 aaPredicted RBP25.49■■□□□ 1.67
CHD4-214ENST00000545942 IRS1P35568 1242 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 CSPP1Q1MSJ5 1256 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 PLA2G4FQ68DD2 849 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 ZNF410Q86VK4 478 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 ABI1Q8IZP0 508 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 COLGALT1Q8NBJ5 622 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 CD320Q9NPF0 282 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 DACT1Q9NYF0 836 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 HCSTQ9UBK5 93 aa25.48■■□□□ 1.67
CHD4-214ENST00000545942 KIAA1671Q9BY89 1806 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 A0A087WZ62 844 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 A0A0U1RQF3 1178 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 FAM205CA6NFA0 338 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 CSDE1O75534 798 aaKnown RBP25.47■■□□□ 1.67
CHD4-214ENST00000545942 FGF18O76093 207 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 BAG4O95429 457 aaKnown RBP25.47■■□□□ 1.67
CHD4-214ENST00000545942 SEC24BO95487 1268 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 LAG3P18627 525 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 GTF2F1P35269 517 aaKnown RBP eCLIP25.47■■□□□ 1.672e-6■□□□□ 10.8
CHD4-214ENST00000545942 EPHA7Q15375 998 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 RHPN2Q8IUC4 686 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 THNSL1Q8IYQ7 743 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 GJD3Q8N144 294 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 SLC7A3Q8WY07 619 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 CASD1Q96PB1 797 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 FDXACB1Q9BRP7 624 aaPredicted RBP25.47■■□□□ 1.67
CHD4-214ENST00000545942 INO80BQ9C086 356 aaPredicted RBP25.47■■□□□ 1.67
CHD4-214ENST00000545942 CWH43Q9H720 699 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 RNF19AQ9NV58 838 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 PPME1Q9Y570 386 aa25.47■■□□□ 1.67
CHD4-214ENST00000545942 MYO7AQ13402 2215 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 CENPBP07199 599 aaPredicted RBP25.46■■□□□ 1.67
CHD4-214ENST00000545942 SFPQP23246 707 aaKnown RBP eCLIP25.46■■□□□ 1.67
CHD4-214ENST00000545942 NPEPPSP55786 919 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 DLX2Q07687 328 aaPredicted RBP25.46■■□□□ 1.67
CHD4-214ENST00000545942 TRIM29Q14134 588 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 NCAPH2Q6IBW4 605 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 ADGRD2Q7Z7M1 963 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 C4orf19Q8IY42 314 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 EXOC8Q8IYI6 725 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 LRRC43Q8N309 656 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 RNF169Q8NCN4 708 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 CEP170P1Q96L14 293 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 LXNQ9BS40 222 aa25.46■■□□□ 1.67
CHD4-214ENST00000545942 CHST12Q9NRB3 414 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms