RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 HAUS4Q9H6D7 363 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CDHR5Q9HBB8 845 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 NPDC1Q9NQX5 325 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 POLE3Q9NRF9 147 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TBC1D22BQ9NU19 505 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PCMTD2Q9NV79 361 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 USP40Q9NVE5 1235 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 SIRT5Q9NXA8 310 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.54□□□□□ -1.522e-7■■□□□ 13.4
UBE4A-203ENST00000545354 HCSTQ9UBK5 93 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TNFRSF10DQ9UBN6 386 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 AMACRQ9UHK6 382 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TSKSQ9UJT2 592 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ZNF180Q9UJW8 692 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CLEC4AQ9UMR7 237 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TTC41PQ6P2S7 1318 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ABCC11Q96J66 1382 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 SETD5Q9C0A6 1442 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8BA8MQT2 603 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 XPO1O14980 1071 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 TSPAN6O43657 245 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PALMO75781 387 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SEC24DO94855 1032 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 FARP2O94887 1054 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 HLA-DRAP01903 254 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 HMGN1P05114 100 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 KRT7P08729 469 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 IFIT2P09913 472 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CDK4P11802 303 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SYN1P17600 705 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 DDX5P17844 614 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ETFBP38117 255 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PRSS12P56730 875 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SGO2Q562F6 1265 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ODF2Q5BJF6 829 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 FAM26DQ5JW98 314 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PRPF38BQ5VTL8 546 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PDE12Q6L8Q7 609 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 FAM122CQ6P4D5 195 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 GALNT7Q86SF2 657 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 LAPTM4BQ86VI4 370 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ALDH16A1Q8IZ83 802 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ANGPTL6Q8NI99 470 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 BCL7CQ8WUZ0 217 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 RUFY2Q8WXA3 655 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CDCA7LQ96GN5 454 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PGBD1Q96JS3 809 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 FAM167AQ96KS9 214 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 NSMCE3Q96MG7 304 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SLF1Q9BQI6 1058 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SIKE1Q9BRV8 207 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CENPKQ9BS16 269 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 LSM14BQ9BX40 385 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 IFIH1Q9BYX4 1025 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CAAP1Q9H8G2 361 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SLC40A1Q9NP59 571 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 C12orf4Q9NQ89 552 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SDHAF3Q9NRP4 125 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 C9orf78Q9NZ63 289 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CBY1Q9Y3M2 126 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 UACAQ9BZF9 1416 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 KDM5BQ9UGL1 1544 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 A0A0G2JPF8 293 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SYCE3A1L190 88 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PTPDC1A2A3K4 754 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 NOTOA8MTQ0 251 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 HNRNPCL3B7ZW38 293 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 FAM47E-STBD1D6RA91 191 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 E2F3O00716 465 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SPOPO43791 374 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 RNGTTO60942 597 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 INMTO95050 263 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CSPG5O95196 566 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 GUCA1CO95843 209 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SLC4A1P02730 911 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CYP2E1P05181 493 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 GLI1P08151 1106 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 HNRNPCL4P0DMR1 293 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ATF3P18847 181 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CRABP2P29373 138 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PPP2R1AP30153 589 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CDC25BP30305 580 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 AXLP30530 894 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 STT3AP46977 705 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 KRT85P78386 507 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 EXOSC10Q01780 885 aaKnown RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ERCC6LQ2NKX8 1250 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 FAM209AQ5JX71 171 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 OR7E24Q6IFN5 339 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 TTBK2Q6IQ55 1244 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ZNF704Q6ZNC4 412 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 MAP7D3Q8IWC1 876 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ENAHQ8N8S7 591 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-203ENST00000545354 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 EHBP1Q8NDI1 1231 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 PJA1Q8NG27 643 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 CABLES1Q8TDN4 633 aa5.53□□□□□ -1.52
UBE4A-203ENST00000545354 NCSTNQ92542 709 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms