RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
C2CD3-220ENST00000544293 VPS13AQ96RL7 3174 aa10.8□□□□□ -0.68
C2CD3-220ENST00000544293 LAMA4Q16363 1823 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 COL1A2P08123 1366 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 DNAH14Q0VDD8 3507 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 PLXNA4Q9HCM2 1894 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 A0A0U1RQF3 1178 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 B4GALT3O60512 393 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 LILRB3O75022 631 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 N4BP1O75113 896 aaKnown RBP10.79□□□□□ -0.68
C2CD3-220ENST00000544293 EOMESO95936 686 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 AOC1P19801 751 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 FGFR4P22455 802 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 SREBF1P36956 1147 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 LIFRP42702 1097 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 MTHFRP42898 656 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 CLCN3P51790 818 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 NLRP11P59045 1033 aaKnown RBP10.79□□□□□ -0.68
C2CD3-220ENST00000544293 KRT17Q04695 432 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 SMC1AQ14683 1233 aaKnown RBP10.79□□□□□ -0.68
C2CD3-220ENST00000544293 TPRNQ4KMQ1 711 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 KIAA1841Q6NSI8 718 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 CES5AQ6NT32 575 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 PDXDC2PQ6P474 469 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 HEATR3Q7Z4Q2 680 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 LRRC43Q8N309 656 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 LRRC2Q9BYS8 371 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 ANO3Q9BYT9 981 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 ZBP1Q9H171 429 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
C2CD3-220ENST00000544293 USTQ9Y2C2 406 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 RBM8AQ9Y5S9 174 aaKnown RBP10.79□□□□□ -0.68
C2CD3-220ENST00000544293 IRAK3Q9Y616 596 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 GPR179Q6PRD1 2367 aa10.79□□□□□ -0.68
C2CD3-220ENST00000544293 BACH1O14867 736 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 NARSO43776 548 aaKnown RBP10.78□□□□□ -0.68
C2CD3-220ENST00000544293 ZNF862O60290 1169 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 CSDE1O75534 798 aaKnown RBP10.78□□□□□ -0.68
C2CD3-220ENST00000544293 SRGAP2BP0DMP2 458 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 CTSAP10619 480 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 EIF4BP23588 611 aaKnown RBP10.78□□□□□ -0.68
C2CD3-220ENST00000544293 METAP2P50579 478 aaKnown RBP eCLIP10.78□□□□□ -0.68
C2CD3-220ENST00000544293 BCAR1P56945 870 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 DRP2Q13474 957 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 ANGPT1Q15389 498 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 ATAT1Q5SQI0 421 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 TMC5Q6UXY8 1006 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 NIPA1Q7RTP0 329 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 TRMT1LQ7Z2T5 733 aaKnown RBP10.78□□□□□ -0.68
C2CD3-220ENST00000544293 GPR149Q86SP6 731 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 VPS52Q8N1B4 723 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 LRRC71Q8N4P6 559 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 METTL13Q8N6R0 699 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 FLCNQ8NFG4 579 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 HELQQ8TDG4 1101 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 BBXQ8WY36 941 aaPredicted RBP10.78□□□□□ -0.68
C2CD3-220ENST00000544293 CEP89Q96ST8 783 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 KCNK12Q9HB15 430 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 CYP26B1Q9NR63 512 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 KIAA1671Q9BY89 1806 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 NCOR2Q9Y618 2525 aa10.78□□□□□ -0.68
C2CD3-220ENST00000544293 KRBA1A5PL33 1030 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 STBD1O95210 358 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 GALTP07902 379 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 CYP3A4P08684 503 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 PPM1AP35813 382 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 GPC3P51654 580 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 ODR4Q5SWX8 454 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 MCTP2Q6DN12 878 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 EFCAB12Q6NXP0 572 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 DDX53Q86TM3 631 aaKnown RBP10.77□□□□□ -0.69
C2CD3-220ENST00000544293 SGMS1Q86VZ5 419 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 TMTC2Q8N394 836 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 TDRD5Q8NAT2 981 aaKnown RBP10.77□□□□□ -0.69
C2CD3-220ENST00000544293 DTWD2Q8NBA8 298 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
C2CD3-220ENST00000544293 NRDE2Q9H7Z3 1164 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
C2CD3-220ENST00000544293 CNTNAP5Q8WYK1 1306 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 MYO10Q9HD67 2058 aa10.77□□□□□ -0.69
C2CD3-220ENST00000544293 MYH6P13533 1939 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 SMCO2A6NFE2 343 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 IPO5O00410 1097 aaKnown RBP10.76□□□□□ -0.69
C2CD3-220ENST00000544293 HOXA2O43364 376 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 FOSP01100 380 aaPredicted RBP10.76□□□□□ -0.69
C2CD3-220ENST00000544293 DARSP14868 501 aaKnown RBP10.76□□□□□ -0.69
C2CD3-220ENST00000544293 MCM5P33992 734 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 AFF1P51825 1210 aaKnown RBP10.76□□□□□ -0.69
C2CD3-220ENST00000544293 TDGQ13569 410 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 AAMPQ13685 434 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 FAM160B1Q5W0V3 765 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 PLA2G4DQ86XP0 818 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 RSAD2Q8WXG1 361 aa10.76□□□□□ -0.69
C2CD3-220ENST00000544293 LPPQ93052 612 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms