RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FOXB1Q99853 325 aa4.8□□□□□ -1.64
SCFD1-207ENST00000544052 GTPBP4Q9BZE4 634 aaKnown RBP4.8□□□□□ -1.64
SCFD1-207ENST00000544052 INCENPQ9NQS7 918 aa4.8□□□□□ -1.64
SCFD1-207ENST00000544052 NUMBLQ9Y6R0 609 aa4.8□□□□□ -1.64
SCFD1-207ENST00000544052 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 PFKMP08237 780 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 U2AF1L5P0DN76 240 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 MC3RP41968 323 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 AFMP43652 599 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 MRPS9P82933 396 aaKnown RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 U2AF1Q01081 240 aaKnown RBP eCLIP4.79□□□□□ -1.648e-6■■□□□ 11.7
SCFD1-207ENST00000544052 KIF23Q02241 960 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 ROM1Q03395 351 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 FZD5Q13467 585 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 GALEQ14376 348 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 MUM1Q2TAK8 710 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 CD300LDQ6UXZ3 194 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 TMC6Q7Z403 805 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 SLC41A1Q8IVJ1 513 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 FLAD1Q8NFF5 587 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 AUTS2Q8WXX7 1259 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 TAAR9Q96RI9 348 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 MTG2Q9H4K7 406 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 PRDM11Q9NQV5 511 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 PRSS50Q9UI38 385 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 RCAN3Q9UKA8 241 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 USP18Q9UMW8 372 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 MYPNQ86TC9 1320 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 ST20-MTHFSA0A0A6YYL1 179 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 OR14I1A6ND48 311 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 ZNF839A8K0R7 811 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 POU2F2P09086 479 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 ENO2P09104 434 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 BIRC2Q13490 618 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 CERS3Q8IU89 383 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 E2F7Q96AV8 911 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 SLC39A13Q96H72 371 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 RPS6KC1Q96S38 1066 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 MPHOSPH6Q99547 160 aaKnown RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 CSRNP2Q9H175 543 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 IFT122Q9HBG6 1241 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 NMRK2Q9NPI5 230 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 EVLQ9UI08 416 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-207ENST00000544052 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
SCFD1-207ENST00000544052 PRDM2Q13029 1718 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 PLIN1O60240 522 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 MTHFD2P13995 350 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 ADKP55263 362 aaKnown RBP4.78□□□□□ -1.64
SCFD1-207ENST00000544052 LILRA6Q6PI73 481 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 CBLL1Q75N03 491 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 STK32CQ86UX6 486 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 RAX2Q96IS3 184 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 PSMD1Q99460 953 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 GALNT8Q9NY28 637 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 HSPBP1Q9NZL4 362 aa4.78□□□□□ -1.64
SCFD1-207ENST00000544052 FRMPD2Q68DX3 1309 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-207ENST00000544052 CTNND1O60716 968 aaKnown RBP4.77□□□□□ -1.65
SCFD1-207ENST00000544052 OFD1O75665 1012 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 HSPA6P17066 643 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 VCAM1P19320 739 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 VIPR1P32241 457 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 SLC5A3P53794 718 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 NCKAP1LP55160 1127 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 NKX3-2P78367 333 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 PPARAQ07869 468 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 HLTFQ14527 1009 aaKnown RBP eCLIP4.77□□□□□ -1.651e-7■□□□□ 9.6
SCFD1-207ENST00000544052 GBX1Q14549 363 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 SKIDA1Q1XH10 827 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 ATAT1Q5SQI0 421 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 MBNL2Q5VZF2 373 aaKnown RBP4.77□□□□□ -1.65
SCFD1-207ENST00000544052 VASNQ6EMK4 673 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 IGDCC4Q8TDY8 1250 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 COA7Q96BR5 231 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 RUNDC1Q96C34 613 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 DDX11Q96FC9 970 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 SLC6A17Q9H1V8 727 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 MAGEL2Q9UJ55 1249 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 DENND2AQ9ULE3 1009 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 LIMCH1Q9UPQ0 1083 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 FAM50BQ9Y247 325 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 WDR62O43379 1518 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 A6NNZ2 444 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 ERC2O15083 957 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 OPHN1O60890 802 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 PDCP20941 246 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 AKAP5P24588 427 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 ECE1P42892 770 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 GLRBP48167 497 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 YBX1P67809 324 aaKnown RBP4.77□□□□□ -1.65
SCFD1-207ENST00000544052 GRAMD1CQ8IYS0 662 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 THEMISQ8N1K5 641 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-207ENST00000544052 OR14C36Q8NHC7 312 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 CALML6Q8TD86 181 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 GAB3Q8WWW8 586 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 SSH1Q8WYL5 1049 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 HPS3Q969F9 1004 aa4.77□□□□□ -1.65
SCFD1-207ENST00000544052 TACO1Q9BSH4 297 aaKnown RBP4.77□□□□□ -1.65
SCFD1-207ENST00000544052 SARGQ9BW04 601 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms