RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PLA2G4FQ68DD2 849 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 CTAGE6Q86UF2 777 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 SLC9A9Q8IVB4 645 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 CTAGE4Q8IX94 777 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 SH2D3AQ9BRG2 576 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 RNF181Q9P0P0 153 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 FHOD1Q9Y613 1164 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 SAR1BQ9Y6B6 198 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 KIAA1217Q5T5P2 1943 aa18.66■□□□□ 0.58
PTPRO-209ENST00000543886 DKC1O60832 514 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 KCNA2P16389 499 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 CLCN6P51797 869 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 PPP2R5AQ15172 486 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 FAM102BQ5T8I3 360 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 PAPD7Q5XG87 772 aaKnown RBP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 DPY19L2P1Q6NXN4 242 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 ATP6V0A1Q93050 837 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 ALS2CR12Q96Q35 445 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 FHDC1Q9C0D6 1143 aaPredicted RBP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 FBXL5Q9UKA1 691 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 ADM5C9JUS6 153 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 PJA2O43164 708 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 ENOX2Q16206 610 aaKnown RBP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 SLC17A8Q8NDX2 589 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 CHST13Q8NET6 341 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 JPH1Q9HDC5 661 aaPredicted RBP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 HDAC6Q9UBN7 1215 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 BZW2Q9Y6E2 419 aaKnown RBP18.65■□□□□ 0.58
PTPRO-209ENST00000543886 NFASCO94856 1347 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 OTOFQ9HC10 1997 aa18.65■□□□□ 0.58
PTPRO-209ENST00000543886 PTPRFP10586 1907 aa18.64■□□□□ 0.58
PTPRO-209ENST00000543886 PSAPP07602 524 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 FMO5P49326 533 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 NPEPPSP55786 919 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 SLC18A3Q16572 532 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 TREML2Q5T2D2 321 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 DLK2Q6UY11 383 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 IWS1Q96ST2 819 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 MLXIPQ9HAP2 919 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 GABBR1Q9UBS5 961 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 RGS20O76081 388 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 MOCS3O95396 460 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 TFRCP02786 760 aaKnown RBP18.64■□□□□ 0.57
PTPRO-209ENST00000543886 KRT13P13646 458 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 PEX3P56589 373 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 EPC1Q9H2F5 836 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 ST6GALNAC4Q9H4F1 302 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 SIX2Q9NPC8 291 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 GPRC5CQ9NQ84 441 aa18.64■□□□□ 0.57
PTPRO-209ENST00000543886 PAPPA2Q9BXP8 1791 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 IREB2P48200 963 aaKnown RBP18.63■□□□□ 0.57
PTPRO-209ENST00000543886 GTF2BQ00403 316 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 TMCO3Q6UWJ1 677 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 ANO5Q75V66 913 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 ANKRD35Q8N283 1001 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 SLC9A2Q9UBY0 812 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 JRKLQ9Y4A0 524 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 CAPN6Q9Y6Q1 641 aa18.63■□□□□ 0.57
PTPRO-209ENST00000543886 POTEB2H3BUK9 544 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 SLC16A4O15374 487 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 MYL7Q01449 175 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 SP4Q02446 784 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 CKAP4Q07065 602 aaKnown RBP18.62■□□□□ 0.57
PTPRO-209ENST00000543886 BFSP1Q12934 665 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 CEP170P1Q96L14 293 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
PTPRO-209ENST00000543886 LCTP09848 1927 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 WDR81Q562E7 1941 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 PFASO15067 1338 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 SPATA31C2B4DYI2 1134 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 TRIM49P0CI25 452 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 TRIM49CP0CI26 452 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 SMTNP53814 917 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 NCKAP1LP55160 1127 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 DMP1Q13316 513 aaPredicted RBP18.62■□□□□ 0.57
PTPRO-209ENST00000543886 STXBP2Q15833 593 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 GADL1Q6ZQY3 521 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 C12orf56Q8IXR9 622 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 RDH13Q8NBN7 331 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 DNERQ8NFT8 737 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 NOX5Q96PH1 765 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 PARD6BQ9BYG5 372 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 PCIF1Q9H4Z3 704 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 FBXO40Q9UH90 709 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 EXOC7Q9UPT5 735 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 A0A0G2JMZ2 1700 aa18.62■□□□□ 0.57
PTPRO-209ENST00000543886 DOCK5Q9H7D0 1870 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 A0A087X0T9 212 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 CCDC169A6NNP5 214 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 FAM228BP0C875 321 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 JAM2P57087 298 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 SNRPFP62306 86 aaKnown RBP18.61■□□□□ 0.57
PTPRO-209ENST00000543886 IQCEQ6IPM2 695 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 SWSAP1Q6NVH7 229 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 MIS18BP1Q6P0N0 1132 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms