RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CHD4Q14839 1912 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 TMEM110-MUSTN1A8MSY1 372 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 CNGA1P29973 690 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 LRRC23Q53EV4 343 aaPredicted RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 ZDHHC24Q6UX98 284 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 KIAA0825Q8IV33 1275 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 ERP27Q96DN0 273 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 GORASP1Q9BQQ3 440 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■□□□ 14.2
SMG8-202ENST00000543872 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 PEX11AO75192 247 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 TPBGLP0DKB5 382 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 GNAZP19086 355 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 PTDSS1P48651 473 aaKnown RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 KCNK18Q7Z418 384 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 THEMISQ8N1K5 641 aaPredicted RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
SMG8-202ENST00000543872 VCXQ9H320 206 aa13.67□□□□□ -0.22
SMG8-202ENST00000543872 KIAA0391O15091 583 aaKnown RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 GM2AP17900 193 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 GALCP54803 685 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 PTENP60484 403 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 MGAT5Q09328 741 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 ECHDC2Q86YB7 292 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 RASGEF1CQ8N431 466 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 SEC14L1Q92503 715 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 FGD4Q96M96 766 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 RASAL2Q9UJF2 1139 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 LAD1O00515 517 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 UNC5CO95185 931 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 OAS1P00973 400 aaKnown RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 RCN2Q14257 317 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMG8-202ENST00000543872 UBR1Q8IWV7 1749 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 SYCE1Q8N0S2 351 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 PNMA5Q96PV4 448 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 MOV10L1Q9BXT6 1211 aaKnown RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 ABCB11O95342 1321 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 MARCH6O60337 910 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 NPTXRO95502 500 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 CCNG1P51959 295 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 SETDB1Q15047 1291 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 FAM26FQ5R3K3 315 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 VPS36Q86VN1 386 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 FAM13CQ8NE31 585 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 GJA10Q969M2 543 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 MYLK2Q9H1R3 596 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 GANQ9H2C0 597 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 METTL5Q9NRN9 209 aaKnown RBP13.66□□□□□ -0.22
SMG8-202ENST00000543872 CYP39A1Q9NYL5 469 aa13.66□□□□□ -0.22
SMG8-202ENST00000543872 RIPK2O43353 540 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 GFPT2O94808 682 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 BRAFP15056 766 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 UCHL3P15374 230 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 EPHB2P29323 1055 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 MAGEA10P43363 369 aaPredicted RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 GYG1P46976 350 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 ARMCX6Q7L4S7 300 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 TBCKQ8TEA7 893 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 RMI1Q9H9A7 625 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 PCMTD2Q9NV79 361 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 WTIPA6NIX2 430 aaPredicted RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 PDE8AO60658 829 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 KCNJ1P48048 391 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 TFAP4Q01664 338 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 MPP2Q14168 576 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 RBM12BQ8IXT5 1001 aaKnown RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 SLC35G2Q8TBE7 412 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 MMADHCQ9H3L0 296 aaPredicted RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 SCOCQ9UIL1 159 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 STXBP5LQ9Y2K9 1186 aa13.65□□□□□ -0.22
SMG8-202ENST00000543872 PARP4Q9UKK3 1724 aaKnown RBP13.65□□□□□ -0.22
SMG8-202ENST00000543872 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms