RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 FIBCD1Q8N539 461 aa21.37■■□□□ 1.01
SPPL3-208ENST00000543854 ZNF668Q96K58 619 aaPredicted RBP21.37■■□□□ 1.01
SPPL3-208ENST00000543854 ADAM2Q99965 735 aa21.37■■□□□ 1.01
SPPL3-208ENST00000543854 RC3H2Q9HBD1 1191 aaKnown RBP21.37■■□□□ 1.01
SPPL3-208ENST00000543854 RNF216Q9NWF9 866 aaPredicted RBP21.37■■□□□ 1.01
SPPL3-208ENST00000543854 SUCLA2Q9P2R7 463 aaPredicted RBP21.37■■□□□ 1.01
SPPL3-208ENST00000543854 LRFN2Q9ULH4 789 aa21.37■■□□□ 1.01
SPPL3-208ENST00000543854 PRRC2BQ5JSZ5 2229 aaKnown RBP21.36■■□□□ 1.01
SPPL3-208ENST00000543854 POTEMA6NI47 508 aa21.36■■□□□ 1.01
SPPL3-208ENST00000543854 MGEA5O60502 916 aa21.36■■□□□ 1.01
SPPL3-208ENST00000543854 DGKIO75912 1065 aa21.36■■□□□ 1.01
SPPL3-208ENST00000543854 DARSP14868 501 aaKnown RBP21.36■■□□□ 1.01
SPPL3-208ENST00000543854 IBSPP21815 317 aaPredicted RBP21.36■■□□□ 1.01
SPPL3-208ENST00000543854 U2AF2P26368 475 aaKnown RBP eCLIP21.36■■□□□ 1.012e-6■■□□□ 12
SPPL3-208ENST00000543854 BTG3Q14201 252 aaPredicted RBP21.36■■□□□ 1.01
SPPL3-208ENST00000543854 EPC2Q52LR7 807 aa21.36■■□□□ 1.01
SPPL3-208ENST00000543854 ZNF410Q86VK4 478 aa21.36■■□□□ 1.01
SPPL3-208ENST00000543854 CCDC43Q96MW1 224 aaKnown RBP21.36■■□□□ 1.01
SPPL3-208ENST00000543854 RGS18Q9NS28 235 aa21.36■■□□□ 1.01
SPPL3-208ENST00000543854 GAS2O43903 313 aaKnown RBP21.35■■□□□ 1.01
SPPL3-208ENST00000543854 LPXNO60711 386 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 SLITRK3O94933 977 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 GJB2P29033 226 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 ZNF174Q15697 407 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 XKR9Q5GH70 373 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 SLC24A5Q71RS6 500 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 RHPN2Q8IUC4 686 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 ZNF689Q96CS4 500 aaPredicted RBP21.35■■□□□ 1.01
SPPL3-208ENST00000543854 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 HSD17B14Q9BPX1 270 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 BACH2Q9BYV9 841 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 GCOM2Q9BZD3 368 aaPredicted RBP21.35■■□□□ 1.01
SPPL3-208ENST00000543854 DHX33Q9H6R0 707 aaKnown RBP21.35■■□□□ 1.01
SPPL3-208ENST00000543854 SMC3Q9UQE7 1217 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 RWDD3Q9Y3V2 267 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.35■■□□□ 1.01
SPPL3-208ENST00000543854 PCDHB7Q9Y5E2 793 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 REV3LO60673 3130 aa21.35■■□□□ 1.01
SPPL3-208ENST00000543854 LYPLA2O95372 231 aa21.34■■□□□ 1.01
SPPL3-208ENST00000543854 CTNNB1P35222 781 aa21.34■■□□□ 1.01
SPPL3-208ENST00000543854 EMC2Q15006 297 aa21.34■■□□□ 1.01
SPPL3-208ENST00000543854 MCTP1Q6DN14 999 aa21.34■■□□□ 1.01
SPPL3-208ENST00000543854 TMEM192Q8IY95 271 aa21.34■■□□□ 1.01
SPPL3-208ENST00000543854 CMTR2Q8IYT2 770 aaKnown RBP21.34■■□□□ 1.01
SPPL3-208ENST00000543854 CRIPAKQ8N1N5 446 aa21.34■■□□□ 1.01
SPPL3-208ENST00000543854 ZNF579Q8NAF0 562 aaKnown RBP21.34■■□□□ 1.01
SPPL3-208ENST00000543854 BMP2KQ9NSY1 1161 aaPredicted RBP21.34■■□□□ 1.01
SPPL3-208ENST00000543854 C9IYK1 514 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 H3BQV1 296 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 ZSCAN20P17040 1043 aaPredicted RBP21.33■■□□□ 1.01
SPPL3-208ENST00000543854 SFPQP23246 707 aaKnown RBP eCLIP21.33■■□□□ 1.01
SPPL3-208ENST00000543854 NBR1Q14596 966 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 TCP11Q8WWU5 503 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 PSPC1Q8WXF1 523 aaKnown RBP21.33■■□□□ 1.01
SPPL3-208ENST00000543854 LMCD1Q9NZU5 365 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 THEGQ9P2T0 379 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 COL4A3BPQ9Y5P4 624 aa21.33■■□□□ 1.01
SPPL3-208ENST00000543854 A0A087WZ62 844 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 TECP42680 631 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 DSC3Q14574 896 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 SKIV2LQ15477 1246 aaKnown RBP21.32■■□□□ 1
SPPL3-208ENST00000543854 PAN2Q504Q3 1202 aaKnown RBP21.32■■□□□ 1
SPPL3-208ENST00000543854 ERMNQ8TAM6 284 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 CLP1Q92989 425 aaKnown RBP21.32■■□□□ 1
SPPL3-208ENST00000543854 TMEM143Q96AN5 459 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 MTRQ99707 1265 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 FDXACB1Q9BRP7 624 aaPredicted RBP21.32■■□□□ 1
SPPL3-208ENST00000543854 INO80BQ9C086 356 aaPredicted RBP21.32■■□□□ 1
SPPL3-208ENST00000543854 TUFT1Q9NNX1 390 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 ANKEF1Q9NU02 776 aa21.32■■□□□ 1
SPPL3-208ENST00000543854 VCANP13611 3396 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 ZBTB39O15060 712 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 FGFR4P22455 802 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 PTPROQ16827 1216 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 KSR1Q8IVT5 923 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 C11orf84Q9BUA3 381 aaPredicted RBP21.31■■□□□ 1
SPPL3-208ENST00000543854 ATP6V0A4Q9HBG4 840 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 PRDM6Q9NQX0 595 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 TMEM161AQ9NX61 479 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 MRPL42Q9Y6G3 142 aaKnown RBP21.31■■□□□ 1
SPPL3-208ENST00000543854 KIAA1671Q9BY89 1806 aa21.31■■□□□ 1
SPPL3-208ENST00000543854 H3BNC9 293 aa21.3■■□□□ 1
SPPL3-208ENST00000543854 CSDE1O75534 798 aaKnown RBP21.3■■□□□ 1
SPPL3-208ENST00000543854 LINC00271P0C7V0 271 aa21.3■■□□□ 1
SPPL3-208ENST00000543854 GATMP50440 423 aa21.3■■□□□ 1
SPPL3-208ENST00000543854 GPM6BQ13491 265 aa21.3■■□□□ 1
SPPL3-208ENST00000543854 HAUS3Q68CZ6 603 aa21.3■■□□□ 1
SPPL3-208ENST00000543854 PRPF31Q8WWY3 499 aaKnown RBP21.3■■□□□ 1
SPPL3-208ENST00000543854 ELAC1Q9H777 363 aaKnown RBP21.3■■□□□ 1
SPPL3-208ENST00000543854 DACT1Q9NYF0 836 aa21.3■■□□□ 1
SPPL3-208ENST00000543854 XIRP2A4UGR9 3374 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 FNDC1Q4ZHG4 1894 aaPredicted RBP21.29■■□□□ 1
SPPL3-208ENST00000543854 C5orf67F2Z3F1 127 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 DGAT1O75907 488 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 RB1P06400 928 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 BMPR1AP36894 532 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 RARRES1P49788 294 aa21.29■■□□□ 1
SPPL3-208ENST00000543854 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
SPPL3-208ENST00000543854 FXR2P51116 673 aaKnown RBP eCLIP21.29■■□□□ 1
SPPL3-208ENST00000543854 CATSPER3Q86XQ3 398 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms