RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PHIPQ8WWQ0 1821 aa17.84■□□□□ 0.45
COL4A1-204ENST00000543140 NR3C2P08235 984 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 FMO5P49326 533 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 HIRAP54198 1017 aaPredicted RBP17.83■□□□□ 0.45
COL4A1-204ENST00000543140 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 NFIL3Q16649 462 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 CBWD6Q4V339 395 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 IQCEQ6IPM2 695 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 REPS2Q8NFH8 660 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 KLRG1Q96E93 195 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 FUT8Q9BYC5 575 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 SUGCTQ9HAC7 445 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 GPRC5DQ9NZD1 345 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 ZNF214Q9UL59 606 aaPredicted RBP17.83■□□□□ 0.45
COL4A1-204ENST00000543140 DOCK5Q9H7D0 1870 aa17.83■□□□□ 0.45
COL4A1-204ENST00000543140 DSG3P32926 999 aa17.83■□□□□ 0.44
COL4A1-204ENST00000543140 DNA2P51530 1060 aa17.83■□□□□ 0.44
COL4A1-204ENST00000543140 SP4Q02446 784 aa17.83■□□□□ 0.44
COL4A1-204ENST00000543140 CKAP4Q07065 602 aaKnown RBP17.83■□□□□ 0.44
COL4A1-204ENST00000543140 XKR9Q5GH70 373 aa17.83■□□□□ 0.44
COL4A1-204ENST00000543140 VSIG10LQ86VR7 867 aa17.83■□□□□ 0.44
COL4A1-204ENST00000543140 ABCB6Q9NP58 842 aa17.83■□□□□ 0.44
COL4A1-204ENST00000543140 LUC7LQ9NQ29 371 aaKnown RBP17.83■□□□□ 0.44
COL4A1-204ENST00000543140 WDR64B1ANS9 1081 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 FDX1P10109 184 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 PSMC5P62195 406 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 C2orf54Q08AI8 447 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 TXLNBQ8N3L3 684 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 SAMD3Q8N6K7 520 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 OSBPL9Q96SU4 736 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 MKNK1Q9BUB5 465 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 SMARCAL1Q9NZC9 954 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 TELO2Q9Y4R8 837 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 SLC16A4O15374 487 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 PLS3P13797 630 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 CCND2P30279 289 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 PEX3P56589 373 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 NAB2Q15742 525 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 FAM102BQ5T8I3 360 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 EHD2Q9NZN4 543 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 PNMA2Q9UL42 364 aa17.82■□□□□ 0.44
COL4A1-204ENST00000543140 GTPBP10A4D1E9 387 aaKnown RBP17.81■□□□□ 0.44
COL4A1-204ENST00000543140 PALMO75781 387 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 GFPT2O94808 682 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 JAM2P57087 298 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 HAUS6Q7Z4H7 955 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 NLRX1Q86UT6 975 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 CCDC125Q86Z20 511 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 C4orf19Q8IY42 314 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 SMAP1Q8IYB5 467 aaPredicted RBP17.81■□□□□ 0.44
COL4A1-204ENST00000543140 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
COL4A1-204ENST00000543140 ZSWIM2Q8NEG5 633 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 GOLGA5Q8TBA6 731 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 HINFPQ9BQA5 517 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 TLR10Q9BXR5 811 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 WDR81Q562E7 1941 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 FAM170AA1A519 330 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 PEX10O60683 326 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 ZMYND10O75800 440 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 LYPLA2O95372 231 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 JAK3P52333 1124 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 DLG4P78352 724 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 KRT76Q01546 638 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
COL4A1-204ENST00000543140 TMOD4Q9NZQ9 345 aa17.81■□□□□ 0.44
COL4A1-204ENST00000543140 C19orf81C9J6K1 198 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 FTCDO95954 541 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 BFSP1Q12934 665 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 ADAMTS5Q9UNA0 930 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 RGS20O76081 388 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 SFNP31947 248 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 MATR3P43243 847 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL4A1-204ENST00000543140 SOX10P56693 466 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 CATSPERGQ6ZRH7 1159 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 ANO5Q75V66 913 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 NSUN6Q8TEA1 469 aaKnown RBP17.8■□□□□ 0.44
COL4A1-204ENST00000543140 HNRNPLLQ8WVV9 542 aaKnown RBP17.8■□□□□ 0.44
COL4A1-204ENST00000543140 C12orf42Q96LP6 360 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 ACCSQ96QU6 501 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 KIFC3Q9BVG8 833 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 MOV10L1Q9BXT6 1211 aaKnown RBP17.8■□□□□ 0.44
COL4A1-204ENST00000543140 NAGPAQ9UK23 515 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 FBXL5Q9UKA1 691 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 HYOU1Q9Y4L1 999 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 BZW2Q9Y6E2 419 aaKnown RBP17.8■□□□□ 0.44
COL4A1-204ENST00000543140 SSC5DA1L4H1 1573 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
COL4A1-204ENST00000543140 ATP8B1O43520 1251 aa17.79■□□□□ 0.44
COL4A1-204ENST00000543140 ERLIN1O75477 346 aa17.79■□□□□ 0.44
COL4A1-204ENST00000543140 MYL7Q01449 175 aa17.79■□□□□ 0.44
COL4A1-204ENST00000543140 TEX13BQ9BXU2 312 aa17.79■□□□□ 0.44
COL4A1-204ENST00000543140 TMEM206Q9H813 350 aa17.79■□□□□ 0.44
COL4A1-204ENST00000543140 A1CFQ9NQ94 594 aaKnown RBP17.79■□□□□ 0.44
COL4A1-204ENST00000543140 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
COL4A1-204ENST00000543140 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms